Regulatory Modules
Displaying 91 - 100 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0003 | 480 | 2300 | 0.40 | DVU0230, DVU0426, DVU1482, DVU1699, DVU1957, DVU2158, DVU2249, DVU2296, DVU2343, DVU2432, DVU2567, DVU3078, DVU3249, DVU3251, DVUA0046 | cell wall organization, cell wall organization or biogenesis, external encapsulating structure organiz..., inorganic anion transmembrane transporte..., anion transmembrane transporter activity |
bicluster_0293 | 360 | 2400 | 0.38 | DVU1721, DVU1715, DVU1717, DVU1718, DVU1719, DVU1720, DVU1723, DVU1725, DVU2597, DVU2789, DVUA0007, DVUA0008, DVUA0143 | nitrogen cycle metabolic process |
bicluster_0130 | 1900 | 2500 | 0.38 | DVU0365, DVU1068, DVU1829, DVU2159, DVU2161, DVU2266, DVUA0009, DVU0375, DVU0497, DVU0887, DVU1490, DVU3129 | nitrogen cycle metabolic process, hydrolase activity, acting on glycosyl b... |
bicluster_0088 | 980 | 2600 | 0.39 | DVU0106, DVU0321, DVU0945, DVU1027, DVU1406, DVU1652, DVU1778, DVU2372, DVU2607, DVU2608, DVU3085, DVU3088, DVU2650, DVU3149 | IMP biosynthetic process, 'de novo' IMP biosynthetic process, IMP metabolic process, purine nucleotide biosynthetic process, purine nucleoside monophosphate biosynth... |
bicluster_0004 | 3.1 | 2600 | 0.45 | DVU0483, DVU0595, DVU0662, DVU0663, DVU0664, DVU0725, DVU0812, DVU1013, DVU1212, DVU1629, DVU1839, DVU1874, DVU2324, DVU2439, DVU2467, DVU2468, DVU2469, DVU2974, DVU3283, DVU3316 | sulfur amino acid metabolic process, sulfur amino acid biosynthetic process, serine family amino acid metabolic proce..., cellular amino acid metabolic process, O-acyltransferase activity |
bicluster_0276 | 690 | 2600 | 0.37 | DVU0215, DVUA0007, DVUA0010, DVUA0013, DVU1164, DVU2710, DVU2711, DVU2713, DVU2715, DVUA0009 | nitrogen cycle metabolic process, hydrolase activity, acting on carbon-nit..., enzyme regulator activity, hydrolase activity, acting on carbon-nit... |
bicluster_0072 | 5.5 | 2700 | 0.31 | DVU0375, DVU1115, DVU1733, DVU1740, DVU2740, DVU0860, DVU0889, DVU2158, DVU2611, DVU2695, DVUA0011 | oxidoreductase activity, acting on iron-... |
bicluster_0257 | 420 | 2800 | 0.32 | DVU0474, DVUA0008, DVUA0037, DVUA0039, DVUA0041, DVUA0065, DVUA0090, DVU2097, DVUA0014, DVUA0045, DVUA0056, DVUA0062, DVUA0063 | lipopolysaccharide metabolic process, lipopolysaccharide biosynthetic process, nitrogen cycle metabolic process, polysaccharide biosynthetic process, polysaccharide metabolic process |
bicluster_0158 | 2700 | 2900 | 0.38 | DVU0857, DVU0865, DVU0994, DVU1267, DVU1602, DVU2470, DVU0242, DVU0758, DVU1278, DVU1336, DVU1337, DVU1874, DVU2310 | ATP binding, adenyl ribonucleotide binding, adenyl nucleotide binding, purine ribonucleoside triphosphate bindi..., nucleoside binding |
bicluster_0231 | 430 | 2900 | 0.46 | DVU1128, DVU1129, DVU1131, DVU1142, DVU2698, DVU2699, DVU2711, DVU1116, DVU1117, DVU1118, DVU1120, DVU1135, DVU1136, DVU1139, DVU1141, DVU1143, DVU2688, DVU2712, DVU2714 | response to extracellular stimulus, cellular response to extracellular stimu..., cellular response to external stimulus, cellular response to stress, DNA metabolic process |