Desulfovibrio vulgaris Hildenborough Module 4 Residual: 0.45

Residual: 0.45 Score: -42.339 version: dvh_cmonkey_11_Mar_02
DVU0483 DNA mismatch repair protein MutL

Details for DVU0483 - DNA mismatch repair protein MutL

GO Terms: GO:0005524, GO:0006298, GO:0032300, GO:0030983

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0483

Tuberculist Genomic Region

DVU1839 Thioredoxin

Details for DVU1839 - Thioredoxin

GO Terms: GO:0045454, GO:0006662, GO:0015035

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1839

Tuberculist Genomic Region

DVU0595 Uncharacterized protein

Details for DVU0595 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0595

Tuberculist Genomic Region

DVU1874 Chaperone protein ClpB

Details for DVU1874 - Chaperone protein ClpB

GO Terms: GO:0005524, GO:0005737, GO:0016485, GO:0009408

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1874

Tuberculist Genomic Region

DVU0662 Serine O-acetyltransferase

Details for DVU0662 - Serine O-acetyltransferase

GO Terms: GO:0009001

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0662

Tuberculist Genomic Region

DVU2324 Copper-translocating P-type ATPase

Details for DVU2324 - Copper-translocating P-type ATPase

GO Terms: GO:0005524, GO:0005507, GO:0004008, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2324

Tuberculist Genomic Region

DVU0663 Cysteine synthase

Details for DVU0663 - Cysteine synthase

GO Terms: GO:0006535, GO:0004124, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0663

Tuberculist Genomic Region

DVU2439 Efflux transporter, RND family, MFP subunit

Details for DVU2439 - Efflux transporter, RND family, MFP subunit

GO Terms: GO:0016020, GO:0055085

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2439

Tuberculist Genomic Region

DVU0664 Cysteine desulfurase

Details for DVU0664 - Cysteine desulfurase

GO Terms: GO:0006520, GO:0031071, GO:0016829, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0664

Tuberculist Genomic Region

DVU2467 Ribonuclease R

Details for DVU2467 - Ribonuclease R

GO Terms: GO:0003723, GO:0005737, GO:0008859

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2467

Tuberculist Genomic Region

DVU0725 Uncharacterized protein

Details for DVU0725 - Uncharacterized protein

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0725

Tuberculist Genomic Region

DVU2468 Tetraacyldisaccharide 4'-kinase

Details for DVU2468 - Tetraacyldisaccharide 4'-kinase

GO Terms: GO:0005524, GO:0009245, GO:0009029

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2468

Tuberculist Genomic Region

DVU0812 Protein GrpE

Details for DVU0812 - Protein GrpE

GO Terms: GO:0000774, GO:0005737, GO:0006457

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0812

Tuberculist Genomic Region

DVU2469 Uncharacterized protein

Details for DVU2469 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2469

Tuberculist Genomic Region

DVU1013 Type I secretion outer membrane protein, TolC family

Details for DVU1013 - Type I secretion outer membrane protein, TolC family

GO Terms: GO:0019867, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1013

Tuberculist Genomic Region

DVU2974 Uncharacterized protein

Details for DVU2974 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2974

Tuberculist Genomic Region

DVU1212 FxsA protein

Details for DVU1212 - FxsA protein

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1212

Tuberculist Genomic Region

DVU3283 Uncharacterized protein

Details for DVU3283 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3283

Tuberculist Genomic Region

DVU1629 Ribosomal subunit interface protein

Details for DVU1629 - Ribosomal subunit interface protein

GO Terms: GO:0044238

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1629

Tuberculist Genomic Region

DVU3316 Dihydroorotate dehydrogenase

Details for DVU3316 - Dihydroorotate dehydrogenase

GO Terms: GO:0006207, GO:0006222, GO:0005737, GO:0004152

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3316

Tuberculist Genomic Region

Motif 1: e-value: 3.1 e-value: 2600
Regulator Interaction Influence Weight Other Influences
DNA-binding response regulator LytR
up-regulates 0.14
Sigma-54 dependent transcriptional regulator/response regulator
up-regulates 0.19
Heat-inducible transcription repressor HrcA
up-regulates 0.31
DNA-binding protein
up-regulates 0.13
Transcriptional regulator, putative
up-regulates 0.18
Transcriptional regulator, Crp/Fnr family
up-regulates 0.10
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0000096 sulfur amino acid metabolic process 3 0.04 1 0.0400
BP GO:0000097 sulfur amino acid biosynthetic process 3 0.04 1 0.0400
BP GO:0009069 serine family amino acid metabolic proce... 3 0.04 1 0.0400
BP GO:0006520 cellular amino acid metabolic process 27 0.37 2 0.0450
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0008374 O-acyltransferase activity 3 0.02 1 0.0186
MF GO:0030554 adenyl nucleotide binding 304 1.90 5 0.0215
MF GO:0017076 purine nucleotide binding 333 2.08 5 0.0317
MF GO:0030234 enzyme regulator activity 6 0.04 1 0.0370
MF GO:0016407 acetyltransferase activity 7 0.04 1 0.0430
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