Regulatory Modules
Displaying 141 - 150 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0079 | 43 | 6700 | 0.35 | DVU1417, DVU1493, DVU1702, DVU1761, DVU1870, DVU1871, DVU2167, DVU0824, DVU2719, DVU2724 | hydrolase activity, acting on carbon-nit..., hydrolase activity, acting on carbon-nit... |
bicluster_0080 | 1000 | 9500 | 0.35 | DVU1053, DVU1107, DVU1162, DVU1504, DVU1513, DVU1515, DVU1516, DVU1969, DVU2604, DVU2645, DVU1417, DVU2647, DVU2720, DVU3139 | DNA (cytosine-5-)-methyltransferase acti..., DNA-methyltransferase activity, deaminase activity, S-adenosylmethionine-dependent methyltra... |
bicluster_0218 | 1600 | 11000 | 0.35 | DVU0825, DVU0663, DVU0665, DVU0811, DVU0812, DVU0857, DVU0994, DVU1468, DVU1976, DVU1977, DVU2078, DVU2079, DVU2643 | sulfur amino acid metabolic process, sulfur amino acid biosynthetic process, serine family amino acid metabolic proce..., sulfur compound metabolic process, sulfur compound biosynthetic process |
bicluster_0177 | 0.34 | DVU1308, DVU1309, DVU1310, DVU1320, DVU1324, DVU1303, DVU1325, DVU1326, DVU1327, DVU1328, DVU1329, DVU1330 | ribosome, ribonucleoprotein complex, intracellular organelle, intracellular non-membrane-bounded organ..., cytoplasmic part | ||
bicluster_0319 | 0.11 | 120 | 0.34 | DVU0778, DVU1636, DVU0774, DVU0775, DVU0776, DVU0777, DVU0779, DVU0780, DVU0845, DVU0846, DVU0847, DVU0848, DVU0849, DVU0850, DVU0851, DVU0918 | nucleoside triphosphate biosynthetic pro..., ribonucleoside triphosphate biosynthetic..., nucleoside triphosphate metabolic proces..., ribonucleoside triphosphate metabolic pr..., transmembrane transport |
bicluster_0210 | 200 | 5000 | 0.34 | DVU2637, DVU2786, DVU0365, DVU0366, DVU1152, DVU1710, DVU1829, DVU2161, DVU2266, DVU2578, DVU2599 | ligase activity, forming carbon-nitrogen..., ligase activity |
bicluster_0212 | 0.34 | DVU1304, DVU1305, DVU1306, DVU1307, DVU1313, DVU1315, DVU1321, DVU1322, DVU1302, DVU1324 | cytoplasm, intracellular, intracellular part, cell, cell part | ||
bicluster_0328 | 370 | 1200 | 0.34 | DVUA0015, DVUA0051, DVU0215, DVU2731, DVUA0013, DVUA0039, DVUA0040, DVUA0042, DVUA0065 | polysaccharide biosynthetic process, polysaccharide metabolic process, cellular polysaccharide biosynthetic pro..., cellular carbohydrate biosynthetic proce..., cellular polysaccharide metabolic proces... |
bicluster_0189 | 1700 | 3200 | 0.34 | DVU0533, DVU0534, DVU0588, DVU0596, DVU0597, DVU2294, DVU0529, DVU0530, DVU0531, DVU0532, DVU0535, DVU0536, DVU0586, DVU0598, DVU0599 | response to extracellular stimulus, cellular response to extracellular stimu..., cellular response to external stimulus, cell wall organization or biogenesis, cellular response to stress |
bicluster_0159 | 70 | 44 | 0.34 | DVU1510, DVU1692, DVU2179, DVU2220, DVU2686, DVU2836, DVU2839, DVUA0017, DVU1509, DVU1519 | DNA binding, nucleic acid binding, sequence-specific DNA binding |