Regulatory Modules
Displaying 131 - 140 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0272 | 0.12 | 1.8 | 0.49 | DVU0129, DVU0222, DVU0690, DVU0720, DVU2443, DVU2633, DVU2799, DVU2800, DVU2801, DVU2847, DVU0629, DVU0677, DVU0722, DVU1440, DVU2180, DVU2351, DVU2747, DVU2835, DVU2933, DVU3016 | signal transducer activity, molecular transducer activity, phosphorelay sensor kinase activity, protein kinase activity, protein histidine kinase activity |
bicluster_0219 | 0.12 | 0.67 | 0.49 | DVU1082, DVU1678, DVU1964, DVU2066, DVU2067, DVU2265, DVU2648, DVU2651, DVU3146, DVU0695, DVU0781, DVU0782, DVU0783, DVU1393, DVU1859, DVU1965, DVU1966, DVU2017, DVU2652, DVU2653, DVU2917, DVU2919, DVU3138 | cellular protein modification process, protein modification process, macromolecule modification, 3'-5' exonuclease activity, hydrolase activity, acting on carbon-nit... |
bicluster_0319 | 0.11 | 120 | 0.34 | DVU0778, DVU1636, DVU0774, DVU0775, DVU0776, DVU0777, DVU0779, DVU0780, DVU0845, DVU0846, DVU0847, DVU0848, DVU0849, DVU0850, DVU0851, DVU0918 | nucleoside triphosphate biosynthetic pro..., ribonucleoside triphosphate biosynthetic..., nucleoside triphosphate metabolic proces..., ribonucleoside triphosphate metabolic pr..., transmembrane transport |
bicluster_0011 | 0.1 | 3700 | 0.49 | DVU0170, DVU0729, DVU0820, DVU0821, DVU0822, DVU0912, DVU0937, DVU1121, DVU1263, DVU1773, DVU1774, DVU1811, DVU1812, DVU2107, DVU2117, DVU2264, DVU2304, DVU2345, DVU2585, DVU2615, DVU2616, DVU2676, DVU2833, DVU3045, DVU3107, DVU3155, DVUA0025 | endopeptidase activity, peptidase activity, acting on L-amino ac..., peptidase activity, copper ion binding, hydrolase activity |
bicluster_0146 | 0.051 | 81000 | 0.50 | DVU0841, DVU0899, DVU0936, DVU0965, DVU0966, DVU1038, DVU1067, DVU1238, DVU1392, DVU1615, DVU1910, DVU1990, DVU2150, DVU2364, DVU2783, DVU2940, DVU3171, DVU3187, DVU3238, DVU3277, DVU0041, DVU0896, DVU1064, DVU1406, DVU1423, DVU1954, DVU2056, DVU2251, DVU2782, DVU2791 | intramolecular oxidoreductase activity, intramolecular oxidoreductase activity, ..., NADP binding |
bicluster_0232 | 0.04 | 3.5 | 0.49 | DVU0302, DVU1190, DVU1372, DVU1373, DVU1374, DVU1375, DVU1377, DVU1378, DVU2532, DVU2965, DVU0837, DVU0838, DVU0936, DVU0942, DVU0986, DVU0987, DVU1093, DVU1367, DVU1392, DVU1612, DVU1834, DVU3187 | RNA processing, ncRNA processing, ncRNA metabolic process, cell cycle, TAT protein transport complex |
bicluster_0200 | 0.037 | 3 | 0.41 | DVU2457, DVUA0040, DVUA0045, DVUA0048, DVUA0055, DVUA0057, DVUA0058, DVUA0059, DVUA0060, DVUA0062, DVUA0063, DVU0086, DVU2458, DVU3105, DVUA0047, DVUA0141, DVUA0146 | polysaccharide biosynthetic process, polysaccharide metabolic process, cellular polysaccharide biosynthetic pro..., cellular carbohydrate biosynthetic proce..., cellular polysaccharide metabolic proces... |
bicluster_0148 | 0.029 | 2.7 | 0.45 | DVU0174, DVU0220, DVU0253, DVU0278, DVU1569, DVU1816, DVU2202, DVU2557, DVU2968, DVU3263, DVU0006, DVU0138, DVU0238, DVU0305, DVU0883, DVU1568, DVU1812, DVU1904, DVU2076, DVU2583, DVU2616, DVU2684, DVU2935, DVU3227, DVU3296 | cellular homeostasis, homeostatic process, regulation of biological quality, biological regulation, copper ion binding |
bicluster_0074 | 0.016 | 150 | 0.41 | DVU0692, DVU0693, DVU0694, DVU0774, DVU0775, DVU0776, DVU0777, DVU0779, DVU0780, DVU0845, DVU0846, DVU0847, DVU0848, DVU0849, DVU0850, DVU0851, DVU0917, DVU0918, DVU0919, DVU1264, DVU1294, DVU1296, DVU1932, DVU1295, DVU1636 | transmembrane transport, purine nucleoside biosynthetic process, purine ribonucleoside biosynthetic proce..., purine nucleoside metabolic process, purine ribonucleoside metabolic process |
bicluster_0223 | 0.012 | 8400 | 0.49 | DVU0135, DVU0660, DVU0724, DVU0796, DVU1060, DVU1220, DVU1693, DVU1827, DVU1942, DVU1978, DVU2436, DVU3389, DVU0136, DVU0141, DVU0323, DVU0414, DVU0726, DVU0795, DVU1029, DVU1091, DVU1540, DVU2055, DVU2210, DVU2471, DVU2493, DVU2552, DVU2892, DVU3208 | cellular nitrogen compound metabolic pro..., cellular aromatic compound metabolic pro..., cellular nitrogen compound biosynthetic ..., IMP biosynthetic process, 'de novo' IMP biosynthetic process |