Regulatory Modules
Displaying 151 - 160 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0018 | 1.5 | 16000 | 0.44 | DVU0004, DVU0563, DVU0835, DVU0837, DVU0838, DVU0839, DVU0927, DVU0928, DVU1033, DVU1074, DVU1257, DVU1302, DVU1334, DVU1676, DVU1792, DVU1931, DVU2215, DVU2222, DVU2538, DVU2920 | nucleic acid metabolic process, cellular macromolecule metabolic process, DNA metabolic process, macromolecule metabolic process, nucleobase-containing compound metabolic... |
bicluster_0120 | 2900 | 16000 | 0.49 | DVU0370, DVU0758, DVU1278, DVU1336, DVU3346, DVU0298, DVU0421, DVU0526, DVU0590, DVU0662, DVU0664, DVU1212, DVU1213, DVU2555, DVU3345 | O-acyltransferase activity, antiporter activity, acetyltransferase activity, secondary active transmembrane transport..., hydrolase activity, acting on carbon-nit... |
bicluster_0268 | 840 | 17000 | 0.47 | DVU0722, DVU1428, DVU2417, DVU2515, DVU3356, DVU0128, DVU0299, DVU0300, DVU0613, DVU1361, DVU1458, DVU1548, DVU1590, DVU2140, DVU2243, DVU2416, DVU2484, DVU2485, DVU2673, DVU2762, DVU3355 | carbohydrate metabolic process, transferase activity, transferring hexos... |
bicluster_0171 | 120 | 17000 | 0.39 | DVU0698, DVU1075, DVU1301, DVU1427, DVU2200, DVU0817, DVU0886, DVU1778, DVU1849, DVU2179, DVU2215, DVU2220 | racemase and epimerase activity, racemase and epimerase activity, acting ..., endonuclease activity, cation transmembrane transporter activit... |
bicluster_0015 | 3200 | 17000 | 0.50 | DVU0022, DVU0117, DVU0286, DVU0539, DVU0621, DVU0681, DVU0807, DVU1163, DVU2023, DVU2041, DVU2502, DVU2661, DVU2736, DVU2906, DVU2994, DVU3000, DVU3007, DVU3128, DVUA0125 | DNA repair, cellular response to DNA damage stimulus, cellular response to stress, DNA metabolic process, copper ion binding |
bicluster_0042 | 6700 | 17000 | 0.35 | DVU1716, DVU1718, DVU1741, DVU2003, DVU2160, DVU2163, DVU2164, DVU2170, DVU2542, DVU2832 | peptidase activity |
bicluster_0019 | 1400 | 17000 | 0.44 | DVU0367, DVU0444, DVU0486, DVU0609, DVU0892, DVU1884, DVU1982, DVU2828, DVU3152, DVU3169, DVU3354, DVU0447, DVU0964, DVU1962 | glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process |
bicluster_0154 | 620 | 18000 | 0.38 | DVU0670, DVU0967, DVU1276, DVU1626, DVU1662, DVU1671, DVU1672, DVU2356, DVU2367, DVU1027, DVU1294, DVU1919, DVU2306, DVU2842, DVU2891 | DNA (cytosine-5-)-methyltransferase acti..., inorganic phosphate transmembrane transp..., O-acyltransferase activity, DNA-methyltransferase activity, phosphate transmembrane transporter acti... |
bicluster_0021 | 94 | 18000 | 0.32 | DVU0887, DVU1122, DVU1490, DVU1696, DVU1712, DVU1757, DVU2165, DVU2186, DVU2262, DVU2344 | hydrolase activity, acting on glycosyl b... |
bicluster_0098 | 210 | 19000 | 0.39 | DVU0280, DVU0281, DVU0669, DVU0817, DVU0954, DVU1688, DVU1690, DVU1793, DVU1796, DVU2373, DVU2569, DVUA0074, DVU1798, DVU1809, DVU1931 | cell envelope organization, Gram-negative-bacterium-type cell outer ..., membrane biogenesis, single-organism membrane organization, membrane organization |