Regulatory Modules
Displaying 21 - 30 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0223 |
0.012 |
8400 |
0.49 | DVU0135, DVU0660, DVU0724, DVU0796, DVU1060, DVU1220, DVU1693, DVU1827, DVU1942, DVU1978, DVU2436, DVU3389, DVU0136, DVU0141, DVU0323, DVU0414, DVU0726, DVU0795, DVU1029, DVU1091, DVU1540, DVU2055, DVU2210, DVU2471, DVU2493, DVU2552, DVU2892, DVU3208 | cellular nitrogen compound metabolic pro..., cellular aromatic compound metabolic pro..., cellular nitrogen compound biosynthetic ..., IMP biosynthetic process, 'de novo' IMP biosynthetic process |
| bicluster_0263 |
0.00000016 |
0.036 |
0.49 | DVU0030, DVU1564, DVU2452, DVU2745, DVU0369, DVU0560, DVU0618, DVU1257, DVU1561, DVU1690, DVU1705, DVU2000, DVU2007, DVU2096, DVU2106, DVU2182, DVU2183, DVU2198, DVU2451, DVU2651, DVU2718, DVU2778, DVUA0028 | integral component of plasma membrane, intrinsic component of plasma membrane, plasma membrane part, nucleic acid binding, DNA binding |
| bicluster_0033 |
510 |
230 |
0.49 | DVU0126, DVU0541, DVU0802, DVU0973, DVU0993, DVU1056, DVU1150, DVU1172, DVU1173, DVU1280, DVU1347, DVU1744, DVU1762, DVU1857, DVU1908, DVU1934, DVU2060, DVU2087, DVU2088, DVU2306, DVU2447, DVU2700, DVU2949, DVU3038, DVU3039, DVU3115, DVU3175, DVU3180, DVU2627 | inorganic phosphate transmembrane transp..., phosphate transmembrane transporter acti..., secondary active transmembrane transport... |
| bicluster_0061 |
23 |
30 |
0.49 | DVU0429, DVU0431, DVU0433, DVU0434, DVU3286, DVUA0001, DVUA0002, DVUA0003, DVUA0021, DVUA0022, DVUA0024, DVUA0035, DVUA0047, DVUA0064, DVUA0083, DVUA0092, DVUA0146, DVUA0148, DVUA0149, DVUA0046 | nucleoside triphosphate metabolic proces..., ribonucleoside triphosphate metabolic pr..., cellular respiration, energy derivation by oxidation of organi..., electron transport chain |
| bicluster_0232 |
0.04 |
3.5 |
0.49 | DVU0302, DVU1190, DVU1372, DVU1373, DVU1374, DVU1375, DVU1377, DVU1378, DVU2532, DVU2965, DVU0837, DVU0838, DVU0936, DVU0942, DVU0986, DVU0987, DVU1093, DVU1367, DVU1392, DVU1612, DVU1834, DVU3187 | RNA processing, ncRNA processing, ncRNA metabolic process, cell cycle, TAT protein transport complex |
| bicluster_0272 |
0.12 |
1.8 |
0.49 | DVU0129, DVU0222, DVU0690, DVU0720, DVU2443, DVU2633, DVU2799, DVU2800, DVU2801, DVU2847, DVU0629, DVU0677, DVU0722, DVU1440, DVU2180, DVU2351, DVU2747, DVU2835, DVU2933, DVU3016 | signal transducer activity, molecular transducer activity, phosphorelay sensor kinase activity, protein kinase activity, protein histidine kinase activity |
| bicluster_0011 |
0.1 |
3700 |
0.49 | DVU0170, DVU0729, DVU0820, DVU0821, DVU0822, DVU0912, DVU0937, DVU1121, DVU1263, DVU1773, DVU1774, DVU1811, DVU1812, DVU2107, DVU2117, DVU2264, DVU2304, DVU2345, DVU2585, DVU2615, DVU2616, DVU2676, DVU2833, DVU3045, DVU3107, DVU3155, DVUA0025 | endopeptidase activity, peptidase activity, acting on L-amino ac..., peptidase activity, copper ion binding, hydrolase activity |
| bicluster_0233 |
0.00041 |
0.00000087 |
0.49 | DVU0618, DVU1477, DVU1705, DVU1706, DVU1734, DVU2180, DVU2717, DVU2718, DVU0570, DVU1427, DVU1478, DVU1480, DVU1520, DVU1521, DVU1711, DVU1745, DVU2178, DVU2709, DVUA0018, DVUA0019, DVUA0020, DVUA0026 | DNA binding, nucleic acid binding, sequence-specific DNA binding |
| bicluster_0067 |
15 |
260 |
0.49 | DVU0028, DVU1127, DVU1161, DVU1779, DVU1998, DVU2187, DVU2253, DVU2812, DVU3044, DVU3160, DVU3214, DVU3260, DVU3329 | |
| bicluster_0235 |
400 |
14000 |
0.49 | DVU0753, DVU2216, DVU3116, DVU0399, DVU0503, DVU0507, DVU0508, DVU0510, DVU0809, DVU0810, DVU1247, DVU1248, DVU1298, DVU1299, DVU1300, DVU1571, DVU1622, DVU2298, DVU2299, DVU2913, DVU2914, DVU3206, DVU3307, DVU3308, DVU3310 | IMP biosynthetic process, 'de novo' IMP biosynthetic process, IMP metabolic process, purine nucleotide biosynthetic process, purine nucleoside monophosphate biosynth... |
