Regulatory Modules
Displaying 51 - 60 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0193 |
3700 |
600 |
0.46 | DVU0069, DVU0488, DVU0668, DVU2217, DVU2549, DVU2550, DVU3082, DVU0316, DVU0494, DVU0514, DVU1602, DVU1940, DVU1941, DVU1957, DVU2326, DVU3162, DVU3257, DVU3387, DVUA0092 | cofactor binding, N-acetyltransferase activity, N-acyltransferase activity, acetyltransferase activity, pyridoxal phosphate binding |
| bicluster_0194 |
5500 |
11000 |
0.46 | DVU0256, DVU0396, DVU0683, DVU0910, DVU0963, DVU1830, DVU2547, DVU0395, DVU0595, DVU0684, DVU0725, DVU0853, DVU1012, DVU1603, DVU2324, DVU2468, DVU2470, DVU2489, DVU2548, DVU2630, DVU2974, DVU3344 | |
| bicluster_0220 |
110 |
600 |
0.46 | DVU1094, DVU1095, DVU1913, DVU3197, DVU3348, DVU3349, DVU3350, DVU1653, DVU3024, DVU3025, DVU3026, DVU3027, DVU3028, DVU3029, DVU3030, DVU3031, DVU3032, DVU3033, DVU3199, DVU3200, DVU3235, DVU3347 | sulfur compound metabolic process, sulfur compound biosynthetic process, glutamine family amino acid biosynthetic..., glutamine family amino acid metabolic pr..., coenzyme biosynthetic process |
| bicluster_0227 |
4100 |
8300 |
0.46 | DVU0525, DVU3366, DVU0759, DVU0825, DVU0856, DVU0864, DVU0865, DVU1191, DVU1193, DVU1267, DVU1432, DVU1467, DVU1788, DVU1789, DVU1855, DVU2363, DVU2487, DVU2488, DVU2554, DVU3243, DVU3315, DVU3365 | peptidase activity, aminopeptidase activity, exopeptidase activity |
| bicluster_0231 |
430 |
2900 |
0.46 | DVU1128, DVU1129, DVU1131, DVU1142, DVU2698, DVU2699, DVU2711, DVU1116, DVU1117, DVU1118, DVU1120, DVU1135, DVU1136, DVU1139, DVU1141, DVU1143, DVU2688, DVU2712, DVU2714 | response to extracellular stimulus, cellular response to extracellular stimu..., cellular response to external stimulus, cellular response to stress, DNA metabolic process |
| bicluster_0280 |
23 |
110 |
0.46 | DVU0172, DVU0173, DVU0186, DVU1169, DVU2110, DVU2560, DVU2562, DVU2563, DVU2802, DVU2803, DVU2805, DVU2806, DVU2807, DVU3290, DVU3291, DVU3312, DVU0250, DVU0251, DVU0308, DVU0309, DVU2510, DVU2804, DVU3292 | glutamate biosynthetic process, dicarboxylic acid biosynthetic process, glutamate metabolic process, dicarboxylic acid metabolic process, glutamine family amino acid biosynthetic... |
| bicluster_0344 |
9.8 |
1100 |
0.46 | DVU0014, DVU0764, DVU0784, DVU0841, DVU0968, DVU1008, DVU1025, DVU1026, DVU1092, DVU1260, DVU1290, DVU1323, DVU2032, DVU2033, DVU2035, DVU2682, DVU2696, DVU2697, DVU2901, DVU3210 | UMP biosynthetic process, pyrimidine ribonucleoside monophosphate ..., pyrimidine ribonucleoside monophosphate ..., 'de novo' UMP biosynthetic process, UMP metabolic process |
| bicluster_0020 |
0.003 |
1 |
0.46 | DVU1542, DVU1543, DVU1565, DVU2624, DVU2646, DVU2647, DVU2702, DVU2703, DVU2719, DVU2720, DVU2721, DVU2722, DVU2723, DVU2724, DVU2727, DVU2728, DVU2729 | deaminase activity |
| bicluster_0191 |
0.0000000000000046 |
0.31 |
0.45 | DVU3122, DVU0273, DVU0303, DVU0304, DVU0762, DVU0763, DVU2377, DVU2378, DVU2379, DVU2380, DVU2383, DVU2388, DVU2389, DVU2390, DVU2571, DVU2572, DVU2573, DVU2574, DVU2680, DVU2681, DVU3331, DVU3332, DVU3333 | ion binding, metal ion binding, cation binding, transition metal ion binding, binding |
| bicluster_0090 |
0.2 |
1400 |
0.45 | DVU0223, DVU0526, DVU0727, DVU0728, DVU0756, DVU1151, DVU1492, DVU1628, DVU1630, DVU1710, DVU1730, DVU1855, DVU2309, DVU2423, DVU2845, DVU2846, DVUA0089, DVU1379, DVU1629, DVU1729, DVU2614 |
