Regulatory Modules
Displaying 91 - 100 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0303 |
0.00013 |
3.6 |
0.43 | DVU0713, DVU0656, DVU0657, DVU0940, DVU1376, DVU1462, DVU1464, DVU1650, DVU1651, DVU1682, DVU2323, DVU2608, DVU2799, DVU2800, DVU2801, DVU3085, DVU3261, DVU3356 | protein complex assembly, cytochrome complex assembly, cellular macromolecular complex assembly, cellular protein complex assembly, macromolecular complex subunit organizat... |
| bicluster_0066 |
2.4 |
3000 |
0.43 | DVU0416, DVU1192, DVU1987, DVU2089, DVU2100, DVU2108, DVU2362, DVU2363, DVU2440, DVU2487, DVU2488, DVU3315, DVU3381, DVU3382 | magnesium ion binding, hydrolase activity, acting on acid anhyd..., hydrolase activity, acting on acid anhyd..., 2 iron, 2 sulfur cluster binding, ion binding |
| bicluster_0343 |
0.0013 |
1.2 |
0.43 | DVU0259, DVU0267, DVU0056, DVU0074, DVU0222, DVU0268, DVU0281, DVU0945, DVU1190, DVU1470, DVU1762, DVU1796, DVU2227, DVU2443, DVU2847, DVU3039, DVU3182, DVU3375 | chemotaxis, taxis, locomotion, response to chemical, response to external stimulus |
| bicluster_0180 |
810 |
26000 |
0.43 | DVU0338, DVU0350, DVU0353, DVU1424, DVU2210, DVU2575, DVU2757, DVU2892, DVU2942, DVU2951, DVU3167, DVU0142, DVU0495, DVU0653, DVU1039, DVU1040, DVU1185, DVU1927, DVU3006, DVU3198 | lipopolysaccharide metabolic process, lipopolysaccharide biosynthetic process, polysaccharide biosynthetic process, polysaccharide metabolic process, cellular polysaccharide biosynthetic pro... |
| bicluster_0347 |
0.5 |
19 |
0.44 | DVU0165, DVU0166, DVU0167, DVU0168, DVU0279, DVU0384, DVU0390, DVU0548, DVU0549, DVU0550, DVU0551, DVU0713, DVU0714, DVU1245, DVU1291, DVU2341, DVUA0069, DVUA0070 | integral component of membrane, intrinsic component of membrane, membrane part, membrane, ribonucleotide binding |
| bicluster_0151 |
180 |
3200 |
0.44 | DVU0873, DVU0874, DVU0956, DVU1287, DVU1288, DVU1289, DVU1293, DVU2519, DVU2922, DVU2925, DVU2927, DVU2928, DVU2929, DVU1574, DVU2231, DVU2518, DVU2923, DVU2924, DVU2926 | transcription, DNA-templated, RNA biosynthetic process, gene expression, RNA metabolic process, organelle |
| bicluster_0018 |
1.5 |
16000 |
0.44 | DVU0004, DVU0563, DVU0835, DVU0837, DVU0838, DVU0839, DVU0927, DVU0928, DVU1033, DVU1074, DVU1257, DVU1302, DVU1334, DVU1676, DVU1792, DVU1931, DVU2215, DVU2222, DVU2538, DVU2920 | nucleic acid metabolic process, cellular macromolecule metabolic process, DNA metabolic process, macromolecule metabolic process, nucleobase-containing compound metabolic... |
| bicluster_0019 |
1400 |
17000 |
0.44 | DVU0367, DVU0444, DVU0486, DVU0609, DVU0892, DVU1884, DVU1982, DVU2828, DVU3152, DVU3169, DVU3354, DVU0447, DVU0964, DVU1962 | glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process |
| bicluster_0048 |
170 |
170 |
0.44 | DVU0079, DVU0128, DVU0327, DVU0413, DVU0612, DVU1019, DVU1242, DVU1458, DVU1590, DVU1611, DVU1813, DVU1814, DVU2243, DVU2409, DVU2484, DVU2485, DVU2762, DVU2787, DVU3255, DVU3261, DVU3375, DVU0441 | aromatic compound catabolic process, cellular nitrogen compound catabolic pro..., heterocycle catabolic process, organic cyclic compound catabolic proces..., cellular respiration |
| bicluster_0085 |
240 |
3900 |
0.44 | DVU0430, DVU0497, DVU0610, DVU1080, DVU1979, DVU2136, DVU2196, DVU2768, DVU3362, DVUA0087, DVU1870, DVU1982, DVU2116, DVU3078 | hydrolase activity, acting on carbon-nit..., hydrolase activity, acting on carbon-nit... |
