Regulatory Modules
Displaying 1 - 10 of 162Methanococcus maripaludis S2
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| mmp-bicluster_0115 |
320 |
2000 |
0.49 | MMP0038, MMP0039, MMP0040, MMP0118, MMP0579, MMP0580, MMP0865, MMP0883, MMP1279, MMP1711, MMP0165, MMP0233, MMP0403, MMP0632, MMP0666, MMP0689, MMP0918, MMP0942, MMP0948, MMP0969, MMP1069, MMP1186, MMP1290, MMP1317, MMP1430, MMP1471, MMP1704, MMP1722, MMP0607 | aspartate family amino acid metabolic pr..., aspartate family amino acid biosynthetic..., ion transmembrane transporter activity, substrate-specific transmembrane transpo..., substrate-specific transporter activity |
| mmp-bicluster_0049 |
1.2 |
19 |
0.49 | MMP0020, MMP0063, MMP0084, MMP0268, MMP0277, MMP0279, MMP0302, MMP0562, MMP0643, MMP0727, MMP0918, MMP1290, MMP1343, MMP1345, MMP1430, MMP1431, MMP0742, MMP1603, MMP0036, MMP0239, MMP0307, MMP0725, MMP0902, MMP1218, MMP1235, MMP1282, MMP1283, MMP1346, MMP1372, MMP1551, MMP1606, MMP1607 | ion binding, binding, ribonucleotide binding, carbohydrate derivative binding |
| mmp-bicluster_0151 |
0.017 |
970 |
0.49 | MMP0009, MMP0063, MMP0369, MMP0598, MMP0614, MMP0886, MMP0939, MMP1056, MMP1262, MMP1343, MMP1388, MMP1525, MMP1679, MMP0090, MMP0585, MMP1179, MMP1526, RNA_47, MMP0725, MMP0769, MMP0515, RNA_23, MMP0475 | ATP-binding cassette (ABC) transporter c..., plasma membrane part, ATPase dependent transmembrane transport..., catalytic complex, transmembrane transporter complex |
| mmp-bicluster_0070 |
150 |
4000 |
0.49 | MMP0183, MMP0220, MMP0382, MMP0385, MMP0397, MMP0399, MMP0400, MMP0500, MMP0899, MMP0900, MMP0954, MMP1137, MMP1138, MMP0270, MMP0272, MMP0273, MMP0274, MMP0345, MMP0371, MMP0402, MMP0448, MMP0449, MMP0450, MMP0451, MMP0498, MMP0618, MMP0619, MMP0620, MMP0816, MMP0898, MMP0904, MMP0949, MMP0966, MMP1022, MMP1089, MMP1093, MMP0398, MMP1129, MMP1139 | ATP binding, adenyl nucleotide binding, adenyl ribonucleotide binding, ion binding, anion binding |
| mmp-bicluster_0058 |
0.39 |
1200 |
0.49 | MMP0050, MMP0051, MMP0097, MMP0180, MMP0210, MMP0369, MMP0480, MMP0487, MMP0613, MMP0712, MMP0722, MMP0757, MMP0788, MMP0922, MMP0923, MMP1134, MMP1135, MMP1136, MMP1229, MMP1439, MMP0059, MMP0096, MMP0181, MMP0209, MMP0256, MMP0257, MMP1493, MMP1550, MMP0734, MMP0932, MMP0524 | intramolecular transferase activity, coenzyme binding, FMN binding, cofactor binding, sequence-specific DNA binding |
| mmp-bicluster_0099 |
3100 |
4900 |
0.48 | MMP0514, MMP1091, MMP1206, MMP1388, MMP0064, MMP0065, MMP0066, MMP0067, MMP0068, MMP0204, MMP0205, MMP0456, MMP0480, MMP0853, MMP0854, MMP0855, MMP0856, MMP0857, MMP0858, MMP0859, MMP0860, MMP1033, MMP1049, MMP1390, MMP1442, MMP1576 | ion transmembrane transporter activity, substrate-specific transmembrane transpo..., substrate-specific transporter activity, transmembrane transporter activity, monovalent inorganic cation transmembran... |
| mmp-bicluster_0041 |
160 |
100 |
0.48 | MMP0108, MMP0141, MMP0216, MMP0493, MMP0670, MMP0861, MMP0862, MMP0866, MMP0867, MMP0868, MMP1334, MMP1441, MMP1585, MMP1612, MMP1651, MMP0026, MMP0142, MMP0144, MMP0610, MMP1150, MMP1200, MMP1700, MMP0146 | porphyrin-containing compound metabolic ..., porphyrin-containing compound biosynthet..., carboxy-lyase activity, hydrolase activity, acting on acid anhyd..., ATPase activity |
| mmp-bicluster_0038 |
3900 |
6500 |
0.47 | MMP0233, MMP0351, MMP0386, MMP0689, MMP0701, MMP0702, MMP0911, MMP1094, MMP1471, MMP1714, MMP1715, MMP1716, MMP0221, MMP0243, MMP0419, MMP0655, MMP0679, MMP0736, MMP0737, MMP0839, MMP0840, MMP1103, MMP1130, MMP1270, MMP1541, MMP1643, MMP0352, MMP0910 | cytokinesis, pyrimidine nucleobase metabolic process, 'de novo' pyrimidine nucleobase biosynth..., cell cycle, nucleobase metabolic process |
| mmp-bicluster_0062 |
11 |
3.8 |
0.46 | MMP0324, MMP0485, MMP0662, MMP0665, MMP0343, MMP0486, MMP0508, MMP0552, MMP0700, MMP0743, MMP0744, MMP0745, MMP0746, MMP0747, MMP0748, MMP0749, MMP0750, MMP0776, MMP0777, MMP0960, MMP1280, MMP1650 | regulation of transcription, DNA-templat..., regulation of nucleobase-containing comp..., regulation of nitrogen compound metaboli..., regulation of RNA metabolic process, regulation of nucleic acid-templated tra... |
| mmp-bicluster_0051 |
7300 |
28000 |
0.46 | MMP0074, MMP0091, MMP0440, MMP0441, MMP0671, MMP0695, MMP1380, MMP1381, MMP1399, MMP1594, MMP0116, MMP0141, MMP0268, MMP0286, MMP0670, MMP0884, MMP0901, MMP1064, MMP1431, MMP1590, MMP0046, MMP0142, MMP0442, MMP0443, MMP0444, MMP0694, MMP1432, MMP1444 | AMP biosynthetic process, AMP metabolic process, purine nucleoside biosynthetic process, purine ribonucleoside biosynthetic proce..., purine nucleoside metabolic process |
