Desulfovibrio vulgaris Hildenborough Module 135 Residual: 0.47

Residual: 0.47 Score: -37.3458 version: dvh_cmonkey_11_Mar_02
DVU0299 Anaerobic ribonucleoside-triphosphate reductase, putative

Details for DVU0299 - Anaerobic ribonucleoside-triphosphate reductase, putative

GO Terms: GO:0005524, GO:0006260, GO:0008998

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0299

Tuberculist Genomic Region

DVU3016 B12 binding domain protein/radical SAM domain protein

Details for DVU3016 - B12 binding domain protein/radical SAM domain protein

GO Terms: GO:0003824, GO:0031419, GO:0051536, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3016

Tuberculist Genomic Region

DVU0300 Radical SAM domain protein

Details for DVU0300 - Radical SAM domain protein

GO Terms: GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0300

Tuberculist Genomic Region

DVU0079 ZIP zinc transporter family protein

Details for DVU0079 - ZIP zinc transporter family protein

GO Terms: GO:0016020, GO:0046873

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0079

Tuberculist Genomic Region

DVU0570 Uncharacterized protein

Details for DVU0570 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0570

Tuberculist Genomic Region

DVU0328 Glycosyl transferase, group 1 family protein

Details for DVU0328 - Glycosyl transferase, group 1 family protein

GO Terms: GO:0009058, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0328

Tuberculist Genomic Region

DVU0677 Transglycosylase domain protein

Details for DVU0677 - Transglycosylase domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0677

Tuberculist Genomic Region

DVU0691 Membrane protein, putative

Details for DVU0691 - Membrane protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0691

Tuberculist Genomic Region

DVU1440 Ribonuclease 3

Details for DVU1440 - Ribonuclease 3

GO Terms: GO:0005737, GO:0006397, GO:0046872, GO:0019843, GO:0016075, GO:0006364, GO:0004525, GO:0008033

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1440

Tuberculist Genomic Region

DVU1004 Membrane protein, putative

Details for DVU1004 - Membrane protein, putative

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1004

Tuberculist Genomic Region

DVU1532 Phosphopantetheine adenylyltransferase

Details for DVU1532 - Phosphopantetheine adenylyltransferase

GO Terms: GO:0005524, GO:0015937, GO:0005737, GO:0004595

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1532

Tuberculist Genomic Region

DVU2373 Outer membrane protein assembly factor BamA

Details for DVU2373 - Outer membrane protein assembly factor BamA

GO Terms: GO:0043165, GO:0009279, GO:0016021, GO:0051205

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2373

Tuberculist Genomic Region

DVU1548 Outer membrane transport protein, OmpP1/FadL/TodX family

Details for DVU1548 - Outer membrane transport protein, OmpP1/FadL/TodX family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1548

Tuberculist Genomic Region

DVU2609 Chemotaxis MotB protein, putative

Details for DVU2609 - Chemotaxis MotB protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2609

Tuberculist Genomic Region

DVU1606 Potassium uptake protein, TrkA family

Details for DVU1606 - Potassium uptake protein, TrkA family

GO Terms: GO:0008324, GO:0006813

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1606

Tuberculist Genomic Region

DVU2779 Extracellular solute-binding protein, putative

Details for DVU2779 - Extracellular solute-binding protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2779

Tuberculist Genomic Region

DVU2251 DNA-binding protein

Details for DVU2251 - DNA-binding protein

GO Terms: GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2251

Tuberculist Genomic Region

DVU3127 Paraquat-inducible protein B

Details for DVU3127 - Paraquat-inducible protein B

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3127

Tuberculist Genomic Region

DVU2747 Uncharacterized protein

Details for DVU2747 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2747

Tuberculist Genomic Region

DVU3392 Glutamine synthetase, type I

Details for DVU3392 - Glutamine synthetase, type I

GO Terms: GO:0004356, GO:0006542

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3392

Tuberculist Genomic Region

DVU2933 Response regulator/sensory box/HDIG domain protein

Details for DVU2933 - Response regulator/sensory box/HDIG domain protein

GO Terms: GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2933

Tuberculist Genomic Region

Motif 1: e-value: 1.9 e-value: 5000
Regulator Interaction Influence Weight Other Influences
Transcriptional regulator, TetR family
up-regulates 0.11
Sigma-54 dependent transcriptional regulator, putative/response regulator
up-regulates 0.11
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0043163 cell envelope organization 4 0.02 1 0.0220
BP GO:0043165 Gram-negative-bacterium-type cell outer ... 4 0.02 1 0.0220
BP GO:0044091 membrane biogenesis 4 0.02 1 0.0220
BP GO:0044802 single-organism membrane organization 4 0.02 1 0.0220
BP GO:0061024 membrane organization 4 0.02 1 0.0220
BP GO:0071709 membrane assembly 4 0.02 1 0.0220
BP GO:0045229 external encapsulating structure organiz... 9 0.05 1 0.0480
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016879 ligase activity, forming carbon-nitrogen... 6 0.04 1 0.0370
MF GO:0008324 cation transmembrane transporter activit... 7 0.04 1 0.0430
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