Desulfovibrio vulgaris Hildenborough Module 191 Residual: 0.45

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Summary

Residual: 0.45 Score: -58.809 version: dvh_cmonkey_11_Mar_02

Members

DVU3122 Uncharacterized protein

Details for DVU3122 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3122

Tuberculist Genomic Region

DVU2389 Biopolymer transport protein, ExbD/TolR family

Details for DVU2389 - Biopolymer transport protein, ExbD/TolR family

GO Terms: GO:0016021, GO:0015031, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2389

Tuberculist Genomic Region

DVU0273 Uncharacterized protein

Details for DVU0273 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0273

Tuberculist Genomic Region

DVU2390 TonB domain protein

Details for DVU2390 - TonB domain protein

GO Terms: GO:0006810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2390

Tuberculist Genomic Region

DVU0303 Uncharacterized protein

Details for DVU0303 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0303

Tuberculist Genomic Region

DVU2571 Ferrous iron transport protein B

Details for DVU2571 - Ferrous iron transport protein B

GO Terms: GO:0005525, GO:0015093, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2571

Tuberculist Genomic Region

DVU0304 Uncharacterized protein

Details for DVU0304 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0304

Tuberculist Genomic Region

DVU2572 Ferrous iron transport protein A, putative

Details for DVU2572 - Ferrous iron transport protein A, putative

GO Terms: GO:0046914

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2572

Tuberculist Genomic Region

DVU0762 Uncharacterized protein

Details for DVU0762 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0762

Tuberculist Genomic Region

DVU2573 Uncharacterized protein

Details for DVU2573 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2573

Tuberculist Genomic Region

DVU0763 GGDEF domain protein

Details for DVU0763 - GGDEF domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0763

Tuberculist Genomic Region

DVU2574 Ferrous ion transport protein, putative

Details for DVU2574 - Ferrous ion transport protein, putative

GO Terms: GO:0046914

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2574

Tuberculist Genomic Region

DVU2377 Uncharacterized protein

Details for DVU2377 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2377

Tuberculist Genomic Region

DVU2680 Flavodoxin

Details for DVU2680 - Flavodoxin

GO Terms: GO:0010181, GO:0009055, GO:0005506, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2680

Tuberculist Genomic Region

DVU2378 Transcriptional regulator, AraC family

Details for DVU2378 - Transcriptional regulator, AraC family

GO Terms: GO:0043565, GO:0003700, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2378

Tuberculist Genomic Region

DVU2681 Uncharacterized protein

Details for DVU2681 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2681

Tuberculist Genomic Region

DVU2379 Peptidase, M16 family, putative

Details for DVU2379 - Peptidase, M16 family, putative

GO Terms: GO:0046872, GO:0004222

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2379

Tuberculist Genomic Region

DVU3331 Uncharacterized protein

Details for DVU3331 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3331

Tuberculist Genomic Region

DVU2380 ABC transporter, ATP-binding protein

Details for DVU2380 - ABC transporter, ATP-binding protein

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2380

Tuberculist Genomic Region

DVU3332 Heavy metal translocating P-type ATPase

Details for DVU3332 - Heavy metal translocating P-type ATPase

GO Terms: GO:0005524, GO:0019829, GO:0016021, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3332

Tuberculist Genomic Region

DVU2383 TonB dependent receptor domain protein

Details for DVU2383 - TonB dependent receptor domain protein

GO Terms: GO:0016020, GO:0004872, GO:0006810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2383

Tuberculist Genomic Region

DVU3333 Uncharacterized protein

Details for DVU3333 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3333

Tuberculist Genomic Region

DVU2388 TolQ protein

Details for DVU2388 - TolQ protein

GO Terms: GO:0016021, GO:0008565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2388

Tuberculist Genomic Region

Displaying 1 - 23 of 23

Motifs

Motif 1: e-value: 0.0000000000000046 e-value: 0.31

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1] up-regulates 0.13

Carbon Monoxide

DVU0118

Sigma-54 dependent transcriptional regulator/response regulator
 up-regulates 0.15

DVU0118

DVU0653

Sigma-54 dependent transcriptional regulator, putative/response regulator
 down-regulates -0.16

DVU0653

DVU0679

Sigma-54 dependent transcriptional regulator/response regulator
 down-regulates -0.20

DVU0679

DVU0942

Transcriptional regulator, Fur family
 down-regulates -0.61

DVU0942

DVU1744

DNA-binding protein
 up-regulates 0.14

DVU1744

DVU2785

Transcriptional regulator, GntR family
 up-regulates 0.11

DVU2785

DVU3080

Transcriptional regulator, putative
 up-regulates 0.18

DVU3080

DVU3313

Transcriptional regulator, LysR family
 up-regulates 0.11

DVU3313

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0043167 ion binding 422 2.64 7 0.0023
MF GO:0046872 metal ion binding 51 0.32 3 0.0029
MF GO:0043169 cation binding 53 0.33 3 0.0032
MF GO:0046914 transition metal ion binding 17 0.11 2 0.0044
MF GO:0005488 binding 789 4.93 8 0.0204

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