Cre03.g189800.t1.2 cyclophilin 38

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g189800.t1.2 chromosome_3 cyclophilin 38 CDS 5883740 5889375 - 5 635

Phytozome

Locus Genomic View Functional Annotation
Cre03.g189800.t1.2 Cre03.g189800.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CYN38 g3930.t1, Cre03.g189800.t1.1 JGI196558 30787830 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0053
motif_0053_1

motif_0053_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.9
Motif Bicluster: 
bicluster_0053
Width: 
24
Number of Sites: 
1
Consensus: 
GcAgCGGcaGtaGCggCgGCngcg
motif_0053_2

motif_0053_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0053
Width: 
15
Number of Sites: 
1
Consensus: 
TttGTaTtgTTgagT
 0.13
bicluster_0054
motif_0054_1

motif_0054_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.032
Motif Bicluster: 
bicluster_0054
Width: 
24
Number of Sites: 
1
Consensus: 
CTGCnGcTGcaGCgGcTGCtGCgG
motif_0054_2

motif_0054_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
170
Motif Bicluster: 
bicluster_0054
Width: 
24
Number of Sites: 
1
Consensus: 
cCGgggCCACCAgcgCCACCTgCa
 0.10

GO Terms

GO:0003755 GO:0006457 -

peptidyl-prolyl cis-trans isomerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

protein folding

GO Category: 
biological_process
Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196558

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