Cre02.g076300.t1.1 Uroporphyrinogen decarboxylase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g076300.t1.1 chromosome_2 Uroporphyrinogen decarboxylase CDS 447339 449531 + 2 192

Phytozome

Locus Genomic View Functional Annotation
Cre02.g076300.t1.1 Cre02.g076300.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
UPD2 g1369.t1 Not available 30785008 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0058
motif_0058_1

motif_0058_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000092
Motif Bicluster: 
bicluster_0058
Width: 
15
Number of Sites: 
1
Consensus: 
AnATGCaaATGCAcA
motif_0058_2

motif_0058_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
36
Motif Bicluster: 
bicluster_0058
Width: 
8
Number of Sites: 
1
Consensus: 
CAAcCAAA
 0.17
bicluster_0174
motif_0174_1

motif_0174_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.76
Motif Bicluster: 
bicluster_0174
Width: 
19
Number of Sites: 
1
Consensus: 
TGtTGGTGTggGTGAtGaa
motif_0174_2

motif_0174_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
52
Motif Bicluster: 
bicluster_0174
Width: 
24
Number of Sites: 
1
Consensus: 
TtTtgcaTgtgTacATaAAGaAaA
 0.17

GO Terms

GO:0004853 GO:0006779 -

uroporphyrinogen decarboxylase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: uroporphyrinogen-III = coproporphyrinogen + 4 CO2.

porphyrin-containing compound biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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