Cre07.g346050.t1.2 dicarboxylate diiron protein, putative (Crd1)

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g346050.t1.2 chromosome_7 dicarboxylate diiron protein, putative (Crd1) CDS 4866866 4871395 - 4 529

Phytozome

Locus Genomic View Functional Annotation
Cre07.g346050.t1.2 Cre07.g346050.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CHL27A g8051.t1, Cre07.g346050.t1.1 JGI183476 30774526 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0114
motif_0114_1

motif_0114_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000045
Motif Bicluster: 
bicluster_0114
Width: 
15
Number of Sites: 
1
Consensus: 
gCCAcCAcCAgCAcC
motif_0114_2

motif_0114_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000004
Motif Bicluster: 
bicluster_0114
Width: 
23
Number of Sites: 
1
Consensus: 
GCgGccGCCGctGcggCTGcTGc
 0.26
bicluster_0139
motif_0139_1

motif_0139_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
9.2e-24
Motif Bicluster: 
bicluster_0139
Width: 
24
Number of Sites: 
1
Consensus: 
ACACAcaCaCACaCACacACACAC
motif_0139_2

motif_0139_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000038
Motif Bicluster: 
bicluster_0139
Width: 
21
Number of Sites: 
1
Consensus: 
ACaCaCACACAcAtACACACA
 0.18

GO Terms

GO:0016491 GO:0046872 GO:0055114 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

metal ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any metal ion.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI183476

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