Cre06.g253350.t1.2 Single hybrid motif superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g253350.t1.2 chromosome_6 Single hybrid motif superfamily protein CDS 608920 610672 + 1 752

Phytozome

Locus Genomic View Functional Annotation
Cre06.g253350.t1.2 Cre06.g253350.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GCSH g5678.t1, Cre06.g253350.t1.1 JGI196067 30778652 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0099
motif_0099_1

motif_0099_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.026
Motif Bicluster: 
bicluster_0099
Width: 
21
Number of Sites: 
1
Consensus: 
tGGtGgTGGCgGnGGCgGtGG
motif_0099_2

motif_0099_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
14
Motif Bicluster: 
bicluster_0099
Width: 
15
Number of Sites: 
1
Consensus: 
atacTaTacTTTtTT
 0.15
bicluster_0185
motif_0185_1

motif_0185_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000027
Motif Bicluster: 
bicluster_0185
Width: 
21
Number of Sites: 
1
Consensus: 
GCGGCGGCggCagcGGCgGcg
motif_0185_2

motif_0185_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0185
Width: 
24
Number of Sites: 
1
Consensus: 
atTGCATtGgGntCgagttacTTg
 0.13

GO Terms

GO:0006546 GO:0005960 -

glycine catabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.

glycine cleavage complex

GO Category: 
cellular_component
Details: 
A protein complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase, also known as L, P, H, and T.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196067

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