Cre08.g380201.t1.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre08.g380201.t1.1 chromosome_8 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative CDS 4192720 4199141 + 6 421

Phytozome

Locus Genomic View Functional Annotation
Cre08.g380201.t1.1 Cre08.g380201.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SHKD1 g8949.t1 Not available 30773877 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0044
motif_0044_1

motif_0044_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.5e-16
Motif Bicluster: 
bicluster_0044
Width: 
21
Number of Sites: 
1
Consensus: 
TgctcCtGCTgcTGCTgCTGC
motif_0044_2

motif_0044_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.76
Motif Bicluster: 
bicluster_0044
Width: 
21
Number of Sites: 
1
Consensus: 
cGTtAnttGtacaattatAaA
 0.14
bicluster_0111
motif_0111_1

motif_0111_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.005
Motif Bicluster: 
bicluster_0111
Width: 
21
Number of Sites: 
1
Consensus: 
TAanTgactAatAaTAAtGtT
motif_0111_2

motif_0111_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000062
Motif Bicluster: 
bicluster_0111
Width: 
15
Number of Sites: 
1
Consensus: 
GCTcctGCTgCtGCT
 0.18

GO Terms

GO:0003855 GO:0004764 GO:0055114 -

3-dehydroquinate dehydratase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: 3-dehydroquinate = 3-dehydroshikimate + H(2)O.

shikimate 3-dehydrogenase (NADP+) activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: shikimate + NADP+ = 3-dehydroshikimate + NADPH + H+.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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