Cre05.g233900.t1.2 ascorbate peroxidase 4

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre05.g233900.t1.2 chromosome_5 ascorbate peroxidase 4 CDS 216149 219990 + 3 841

Phytozome

Locus Genomic View Functional Annotation
Cre05.g233900.t1.2 Cre05.g233900.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
APX4 g5095.t1, Cre05.g233900.t1.1 JGI206548 30783103 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0053
motif_0053_1

motif_0053_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.9
Motif Bicluster: 
bicluster_0053
Width: 
24
Number of Sites: 
1
Consensus: 
GcAgCGGcaGtaGCggCgGCngcg
motif_0053_2

motif_0053_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0053
Width: 
15
Number of Sites: 
1
Consensus: 
TttGTaTtgTTgagT
 0.13
bicluster_0172
motif_0172_1

motif_0172_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.3
Motif Bicluster: 
bicluster_0172
Width: 
15
Number of Sites: 
1
Consensus: 
AgGAAAGaagnAAaa
motif_0172_2

motif_0172_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
94000
Motif Bicluster: 
bicluster_0172
Width: 
21
Number of Sites: 
1
Consensus: 
tctGTAaTAcAtCTagGanaA
 0.14

GO Terms

GO:0004601 GO:0020037 GO:0006979 GO:0055114 -

peroxidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.

heme binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

response to oxidative stress

GO Category: 
biological_process
Details: 
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI206548

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