Cre13.g606050.t1.2 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g606050.t1.2 chromosome_13 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial CDS 4921198 4926227 + 5 029

Phytozome

Locus Genomic View Functional Annotation
Cre13.g606050.t1.2 Cre13.g606050.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
TSY1 g14615.t1, Cre13.g606050.t1.1 JGI380926 30783924 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0159
motif_0159_1

motif_0159_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000017
Motif Bicluster: 
bicluster_0159
Width: 
15
Number of Sites: 
1
Consensus: 
aagtAtaaTAaAAtA
motif_0159_2

motif_0159_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1
Motif Bicluster: 
bicluster_0159
Width: 
24
Number of Sites: 
1
Consensus: 
GgCAgCgGCAGgagCAGCaGCAgC
 0.24
bicluster_0211
motif_0211_1

motif_0211_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.0000000000000036
Motif Bicluster: 
bicluster_0211
Width: 
15
Number of Sites: 
1
Consensus: 
CAGcAGCaGcaGCAG
motif_0211_2

motif_0211_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.00000000000031
Motif Bicluster: 
bicluster_0211
Width: 
21
Number of Sites: 
1
Consensus: 
ACACACACAnACtcACatgcA
 0.22

GO Terms

GO:0000166 GO:0004812 GO:0005524 GO:0006418 GO:0003723 -

nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

aminoacyl-tRNA ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

tRNA aminoacylation for protein translation

GO Category: 
biological_process
Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI380926

Add comment

Log in to post comments