Cre03.g158000.t1.2 glutamate-1-semialdehyde 2,1-aminomutase 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g158000.t1.2 chromosome_3 glutamate-1-semialdehyde 2,1-aminomutase 2 CDS 2272727 2276164 + 3 437

Phytozome

Locus Genomic View Functional Annotation
Cre03.g158000.t1.2 Cre03.g158000.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GSA1 g3234.t1, Cre03.g158000.t1.1 JGI138524 30786587 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0069
motif_0069_1

motif_0069_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.14
Motif Bicluster: 
bicluster_0069
Width: 
21
Number of Sites: 
1
Consensus: 
GCTGctgCtGcCGcTgCCGnt
motif_0069_2

motif_0069_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.5
Motif Bicluster: 
bicluster_0069
Width: 
15
Number of Sites: 
1
Consensus: 
aATGaAAcagTGcaA
 0.14
bicluster_0134
motif_0134_1

motif_0134_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
450000
Motif Bicluster: 
bicluster_0134
Width: 
23
Number of Sites: 
1
Consensus: 
AACTAATGCGTACGcAGACCAGA
motif_0134_2

motif_0134_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
660
Motif Bicluster: 
bicluster_0134
Width: 
24
Number of Sites: 
1
Consensus: 
TaAaTTtccaTattTacaTgCcaa
 0.11

GO Terms

GO:0008483 GO:0030170 -

transaminase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

pyridoxal phosphate binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI138524

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