Cre12.g493500.t1.2 FAD-dependent oxidoreductase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g493500.t1.2 chromosome_12 FAD-dependent oxidoreductase family protein CDS 460166 465637 - 5 471

Phytozome

Locus Genomic View Functional Annotation
Cre12.g493500.t1.2 Cre12.g493500.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SOX1 g12080.t1, Cre12.g493500.t1.1 JGI153238 30792935 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0101
motif_0101_1

motif_0101_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.4e-17
Motif Bicluster: 
bicluster_0101
Width: 
24
Number of Sites: 
1
Consensus: 
cnGCTGctggTGCtGcTaCTGccG
motif_0101_2

motif_0101_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000043
Motif Bicluster: 
bicluster_0101
Width: 
21
Number of Sites: 
1
Consensus: 
caGCTgCAGcgGCaGctGCgg
 0.34
bicluster_0110
motif_0110_1

motif_0110_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.5e-27
Motif Bicluster: 
bicluster_0110
Width: 
15
Number of Sites: 
1
Consensus: 
tGCTGCTGCtGCtGc
motif_0110_2

motif_0110_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000002
Motif Bicluster: 
bicluster_0110
Width: 
24
Number of Sites: 
1
Consensus: 
CCacCGCCgCCGCCgctgcCgcCG
 0.25

GO Terms

GO:0016491 GO:0055114 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI153238

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