Cre01.g051800.t1.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g051800.t1.1 chromosome_1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein CDS 7207255 7212170 - 4 915

Phytozome

Locus Genomic View Functional Annotation
Cre01.g051800.t1.1 Cre01.g051800.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AST2 g1148.t1 JGI146923 30789311 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0001
motif_0001_1

motif_0001_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.9e-28
Motif Bicluster: 
bicluster_0001
Width: 
24
Number of Sites: 
1
Consensus: 
CAcCaCCagCaCCacCaCCacCaC
motif_0001_2

motif_0001_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0001
Width: 
0
Number of Sites: 
1
 0.02
bicluster_0032
motif_0032_1

motif_0032_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00032
Motif Bicluster: 
bicluster_0032
Width: 
21
Number of Sites: 
1
Consensus: 
TGcTGcTncTGctGttgcTGC
motif_0032_2

motif_0032_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0032
Width: 
0
Number of Sites: 
1
 0.26

GO Terms

GO:0030170 GO:0009058 -

pyridoxal phosphate binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI146923

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