Cre12.g560550.t1.1 formyltransferase, putative

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g560550.t1.1 chromosome_12 formyltransferase, putative CDS 6927458 6931025 + 3 567

Phytozome

Locus Genomic View Functional Annotation
Cre12.g560550.t1.1 Cre12.g560550.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
MTF1 g13308.t1 JGI83209 30792321 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0005
motif_0005_1

motif_0005_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.9e-20
Motif Bicluster: 
bicluster_0005
Width: 
21
Number of Sites: 
1
Consensus: 
cCgcCaCCacCgCCacCnCCn
motif_0005_2

motif_0005_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0057
Motif Bicluster: 
bicluster_0005
Width: 
11
Number of Sites: 
1
Consensus: 
ACAaACAcAcA
 0.49
bicluster_0169
motif_0169_1

motif_0169_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0003
Motif Bicluster: 
bicluster_0169
Width: 
14
Number of Sites: 
1
Consensus: 
ACACAcGCACaCgC
motif_0169_2

motif_0169_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.1e-21
Motif Bicluster: 
bicluster_0169
Width: 
21
Number of Sites: 
1
Consensus: 
CaGCacCAgCagCagCggCAg
 0.25

GO Terms

GO:0016742 GO:0009058 -

hydroxymethyl-, formyl- and related transferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI83209

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