Cre10.g422800.t1.1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g422800.t1.1 chromosome_10 CDS 746574 752550 - 5 976

Phytozome

Locus Genomic View Functional Annotation
Cre10.g422800.t1.1 Cre10.g422800.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HER1 g10460.t1 Not available 30790180 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0013
motif_0013_1

motif_0013_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000011
Motif Bicluster: 
bicluster_0013
Width: 
21
Number of Sites: 
1
Consensus: 
TgCTGCTGctGCTGCtGCTGc
motif_0013_2

motif_0013_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.045
Motif Bicluster: 
bicluster_0013
Width: 
15
Number of Sites: 
1
Consensus: 
gTGcagGTGtAGgTG
 0.15
bicluster_0137
motif_0137_1

motif_0137_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000019
Motif Bicluster: 
bicluster_0137
Width: 
21
Number of Sites: 
1
Consensus: 
AGcagcAGcaaCAGcngnggc
motif_0137_2

motif_0137_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0137
Width: 
0
Number of Sites: 
1
 0.28

GO Terms

GO:0003676 GO:0005622 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

intracellular

GO Category: 
cellular_component
Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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