Cre03.g192050.t1.1 Iron permease, membrane protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g192050.t1.1 chromosome_3 Iron permease, membrane protein CDS 6157033 6160982 - 3 949

Phytozome

Locus Genomic View Functional Annotation
Cre03.g192050.t1.1 Cre03.g192050.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g3975.t1 JGI137142 30788083 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0040
motif_0040_1

motif_0040_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000073
Motif Bicluster: 
bicluster_0040
Width: 
24
Number of Sites: 
1
Consensus: 
aCaGcaaCAgcaGCAgcgGCAGca
motif_0040_2

motif_0040_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.77
Motif Bicluster: 
bicluster_0040
Width: 
23
Number of Sites: 
1
Consensus: 
GTTTgCTGaTGCgCATTcCtCAt
 0.25
bicluster_0055
motif_0055_1

motif_0055_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0011
Motif Bicluster: 
bicluster_0055
Width: 
24
Number of Sites: 
1
Consensus: 
TaTaaaaATntatncagaaAtgaA
motif_0055_2

motif_0055_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00056
Motif Bicluster: 
bicluster_0055
Width: 
15
Number of Sites: 
1
Consensus: 
cgTGTGTGTgTgTGT
 0.34

GO Terms

GO:0055085 GO:0016020 -

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI137142

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