Cre06.g269950.t1.2 ATPase, AAA-type, CDC48 protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g269950.t1.2 chromosome_6 ATPase, AAA-type, CDC48 protein CDS 2643756 2650925 + 7 169

Phytozome

Locus Genomic View Functional Annotation
Cre06.g269950.t1.2 Cre06.g269950.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CDC48, EZY21, NSG14 g6057.t1, Cre06.g269950.t1.1 JGI134171 30778959 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0176
motif_0176_1

motif_0176_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000064
Motif Bicluster: 
bicluster_0176
Width: 
21
Number of Sites: 
1
Consensus: 
CAGCACCAgCagCAgcagCAc
motif_0176_2

motif_0176_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000039
Motif Bicluster: 
bicluster_0176
Width: 
15
Number of Sites: 
1
Consensus: 
tGGcgGtGGcGGCaG
 0.39
bicluster_0206
motif_0206_1

motif_0206_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.000023
Motif Bicluster: 
bicluster_0206
Width: 
21
Number of Sites: 
1
Consensus: 
CagCAnCAGCgacAgCgnCAg
motif_0206_2

motif_0206_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.11
Motif Bicluster: 
bicluster_0206
Width: 
24
Number of Sites: 
1
Consensus: 
CGTaGtaGAcCCGGTCACTGAAAG
 0.28

GO Terms

GO:0005524 -

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI134171

Add comment

Log in to post comments