Cre08.g378650.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre08.g378650.t1.2 chromosome_8 CDS 3951684 3954525 + 2 841

Phytozome

Locus Genomic View Functional Annotation
Cre08.g378650.t1.2 Cre08.g378650.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g8913.t1, Cre08.g378650.t1.1 JGI118180 30773607 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0138
motif_0138_1

motif_0138_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3e-37
Motif Bicluster: 
bicluster_0138
Width: 
24
Number of Sites: 
1
Consensus: 
ACACaCACaCACACACACACACaC
motif_0138_2

motif_0138_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000013
Motif Bicluster: 
bicluster_0138
Width: 
15
Number of Sites: 
1
Consensus: 
ACACACacaCACACA
 0.23
bicluster_0206
motif_0206_1

motif_0206_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.000023
Motif Bicluster: 
bicluster_0206
Width: 
21
Number of Sites: 
1
Consensus: 
CagCAnCAGCgacAgCgnCAg
motif_0206_2

motif_0206_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.11
Motif Bicluster: 
bicluster_0206
Width: 
24
Number of Sites: 
1
Consensus: 
CGTaGtaGAcCCGGTCACTGAAAG
 0.28

GO Terms

GO:0004848 GO:0000256 -

ureidoglycolate hydrolase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: (S)-ureidoglycolate + H(2)O + 2 H(+) = CO(2) + glyoxylate + 2 NH(4)(+).

allantoin catabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the breakdown of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI118180

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