Cre02.g086550.t1.1 Radical SAM superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g086550.t1.1 chromosome_2 Radical SAM superfamily protein CDS 1757153 1761394 + 4 241

Phytozome

Locus Genomic View Functional Annotation
Cre02.g086550.t1.1 Cre02.g086550.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g1606.t1 JGI166362 30785530 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0040
motif_0040_1

motif_0040_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000073
Motif Bicluster: 
bicluster_0040
Width: 
24
Number of Sites: 
1
Consensus: 
aCaGcaaCAgcaGCAgcgGCAGca
motif_0040_2

motif_0040_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.77
Motif Bicluster: 
bicluster_0040
Width: 
23
Number of Sites: 
1
Consensus: 
GTTTgCTGaTGCgCATTcCtCAt
 0.25
bicluster_0197
motif_0197_1

motif_0197_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000015
Motif Bicluster: 
bicluster_0197
Width: 
21
Number of Sites: 
1
Consensus: 
aacatAcAATataagAAanaa
motif_0197_2

motif_0197_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.32
Motif Bicluster: 
bicluster_0197
Width: 
15
Number of Sites: 
1
Consensus: 
GttgTTGntggCATG
 0.23

GO Terms

GO:0003824 GO:0051536 -

catalytic activity

GO Category: 
molecular_function
Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.

iron-sulfur cluster binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI166362

Add comment

Log in to post comments