Cre12.g500650.t1.2 Ribonuclease II/R family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g500650.t1.2 chromosome_12 Ribonuclease II/R family protein CDS 3039796 3046927 + 7 131

Phytozome

Locus Genomic View Functional Annotation
Cre12.g500650.t1.2 Cre12.g500650.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12563.t1, Cre12.g500650.t1.1 JGI188559 30792398 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0008
motif_0008_1

motif_0008_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000042
Motif Bicluster: 
bicluster_0008
Width: 
15
Number of Sites: 
1
Consensus: 
CACatGCAaACAngC
motif_0008_2

motif_0008_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000021
Motif Bicluster: 
bicluster_0008
Width: 
21
Number of Sites: 
1
Consensus: 
gctGccgcTGCTaCtGCCgCn
 0.13
bicluster_0211
motif_0211_1

motif_0211_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.0000000000000036
Motif Bicluster: 
bicluster_0211
Width: 
15
Number of Sites: 
1
Consensus: 
CAGcAGCaGcaGCAG
motif_0211_2

motif_0211_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.00000000000031
Motif Bicluster: 
bicluster_0211
Width: 
21
Number of Sites: 
1
Consensus: 
ACACACACAnACtcACatgcA
 0.22

GO Terms

GO:0003723 GO:0004540 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

ribonuclease activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI188559

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