Cre01.g000650.t1.1 Copper amine oxidase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g000650.t1.1 chromosome_1 Copper amine oxidase family protein CDS 89576 97537 + 7 961

Phytozome

Locus Genomic View Functional Annotation
Cre01.g000650.t1.1 Cre01.g000650.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AMX2 g16.t1 JGI178662 30788868 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0103
motif_0103_1

motif_0103_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000058
Motif Bicluster: 
bicluster_0103
Width: 
24
Number of Sites: 
1
Consensus: 
GCaGCagCAgCAGCAcctgCAGCA
motif_0103_2

motif_0103_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.5
Motif Bicluster: 
bicluster_0103
Width: 
21
Number of Sites: 
1
Consensus: 
AAacncCAgtagtcTtnAaaA
 0.16
bicluster_0187
motif_0187_1

motif_0187_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
41
Motif Bicluster: 
bicluster_0187
Width: 
24
Number of Sites: 
1
Consensus: 
AccCTatGGGACttcgCcAAcCTG
motif_0187_2

motif_0187_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
90
Motif Bicluster: 
bicluster_0187
Width: 
23
Number of Sites: 
1
Consensus: 
TtAatcCtgTCccAtnTcACatC
 0.16

GO Terms

GO:0005507 GO:0008131 GO:0048038 GO:0009308 GO:0055114 -

copper ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with copper (Cu) ions.

primary amine oxidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.

quinone binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.

amine metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI178662

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