Cre01.g007500.t2.1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g007500.t2.1 chromosome_1 CDS 1458851 1470637 - 11 786

Phytozome

Locus Genomic View Functional Annotation
Cre01.g007500.t2.1 Cre01.g007500.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
NSS1 g194.t1 Not available 30788466 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0124
motif_0124_1

motif_0124_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.5e-32
Motif Bicluster: 
bicluster_0124
Width: 
24
Number of Sites: 
1
Consensus: 
CGCCGCCGcCGCcGCcGCCGCCGC
motif_0124_2

motif_0124_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.3e-25
Motif Bicluster: 
bicluster_0124
Width: 
24
Number of Sites: 
1
Consensus: 
acacaCACacaCACanAcaCaCAC
 0.27
bicluster_0196
motif_0196_1

motif_0196_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.2e-19
Motif Bicluster: 
bicluster_0196
Width: 
21
Number of Sites: 
1
Consensus: 
tGCtgCTgCTGCtgctGCTGC
motif_0196_2

motif_0196_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0196
Width: 
13
Number of Sites: 
1
Consensus: 
CACACAtgCacAC
 0.28

GO Terms

GO:0005215 GO:0006810 GO:0055085 GO:0016020 -

transporter activity

GO Category: 
molecular_function
Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

transport

GO Category: 
biological_process
Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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