Cre01.g009400.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g009400.t1.2 chromosome_1 CDS 1748305 1759279 + 10 974

Phytozome

Locus Genomic View Functional Annotation
Cre01.g009400.t1.2 Cre01.g009400.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
NSS2 g237.t1, Cre01.g009400.t1.1 Not available 30788857 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0060
motif_0060_1

motif_0060_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0059
Motif Bicluster: 
bicluster_0060
Width: 
24
Number of Sites: 
1
Consensus: 
atcAcgtnAtantATATaTAttat
motif_0060_2

motif_0060_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
29
Motif Bicluster: 
bicluster_0060
Width: 
21
Number of Sites: 
1
Consensus: 
TAGTTgGGGCTGGTaTTTcCA
 0.16
bicluster_0103
motif_0103_1

motif_0103_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000058
Motif Bicluster: 
bicluster_0103
Width: 
24
Number of Sites: 
1
Consensus: 
GCaGCagCAgCAGCAcctgCAGCA
motif_0103_2

motif_0103_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.5
Motif Bicluster: 
bicluster_0103
Width: 
21
Number of Sites: 
1
Consensus: 
AAacncCAgtagtcTtnAaaA
 0.16

GO Terms

GO:0005215 GO:0006810 GO:0055085 GO:0016020 -

transporter activity

GO Category: 
molecular_function
Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

transport

GO Category: 
biological_process
Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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