Cre01.g015250.t1.1 DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g015250.t1.1 chromosome_1 DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA... CDS 2620925 2630702 - 9 777

Phytozome

Locus Genomic View Functional Annotation
Cre01.g015250.t1.1 Cre01.g015250.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
POLD1 g368.t1 JGI189721 30788505 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0094
motif_0094_1

motif_0094_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000035
Motif Bicluster: 
bicluster_0094
Width: 
15
Number of Sites: 
1
Consensus: 
GcGGCGGcGgcGGcG
motif_0094_2

motif_0094_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
130
Motif Bicluster: 
bicluster_0094
Width: 
24
Number of Sites: 
1
Consensus: 
AnGAnGagGagGAgGAGGnaGAcg
 0.32
bicluster_0198
motif_0198_1

motif_0198_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0008
Motif Bicluster: 
bicluster_0198
Width: 
24
Number of Sites: 
1
Consensus: 
gcgGCAgcaGccgcgGCaGtgGCg
motif_0198_2

motif_0198_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.5
Motif Bicluster: 
bicluster_0198
Width: 
21
Number of Sites: 
1
Consensus: 
cCagCCcCgCCGCCgCCgCCg
 0.31

GO Terms

GO:0000166 GO:0003677 GO:0003887 GO:0006260 -

nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

DNA binding

GO Category: 
molecular_function
Details: 
Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).

DNA-directed DNA polymerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer.

DNA replication

GO Category: 
biological_process
Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI189721

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