Cre01.g017450.t1.1 DNA polymerase alpha 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g017450.t1.1 chromosome_1 DNA polymerase alpha 2 CDS 2874477 2878902 - 4 425

Phytozome

Locus Genomic View Functional Annotation
Cre01.g017450.t1.1 Cre01.g017450.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g413.t1 JGI146295 30788627 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0092
motif_0092_1

motif_0092_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000018
Motif Bicluster: 
bicluster_0092
Width: 
21
Number of Sites: 
1
Consensus: 
CCgnCgCCtCCacCaCcaCCa
motif_0092_2

motif_0092_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.2
Motif Bicluster: 
bicluster_0092
Width: 
21
Number of Sites: 
1
Consensus: 
AtGTgTgTtTgTTtGtgtnTG
 0.26
bicluster_0141
motif_0141_1

motif_0141_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.001
Motif Bicluster: 
bicluster_0141
Width: 
15
Number of Sites: 
1
Consensus: 
CCgCCACCaCcaCCG
motif_0141_2

motif_0141_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.091
Motif Bicluster: 
bicluster_0141
Width: 
15
Number of Sites: 
1
Consensus: 
CAgCACcagCAgCAg
 0.18

GO Terms

GO:0003677 GO:0003887 GO:0006260 -

DNA binding

GO Category: 
molecular_function
Details: 
Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).

DNA-directed DNA polymerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer.

DNA replication

GO Category: 
biological_process
Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI146295

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