Cre01.g018000.t1.1 TFIIB zinc-binding protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g018000.t1.1 chromosome_1 TFIIB zinc-binding protein CDS 2948891 2951156 - 2 265

Phytozome

Locus Genomic View Functional Annotation
Cre01.g018000.t1.1 Cre01.g018000.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g424.t1 JGI183563 30788815 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0127
motif_0127_1

motif_0127_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8
Motif Bicluster: 
bicluster_0127
Width: 
24
Number of Sites: 
1
Consensus: 
CcAcCAgcgccGCCATCagcngcc
motif_0127_2

motif_0127_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
18
Motif Bicluster: 
bicluster_0127
Width: 
24
Number of Sites: 
1
Consensus: 
TTACatTcaTGatTAgcTaAGGaA
 0.16
bicluster_0179
motif_0179_1

motif_0179_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00083
Motif Bicluster: 
bicluster_0179
Width: 
11
Number of Sites: 
1
Consensus: 
AGCaGCAGCAg
motif_0179_2

motif_0179_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.67
Motif Bicluster: 
bicluster_0179
Width: 
21
Number of Sites: 
1
Consensus: 
CgCCaCCAGCgCCGnCagCag
 0.15

GO Terms

GO:0003676 GO:0008270 GO:0006351 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

zinc ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.

transcription, DNA-dependent

GO Category: 
biological_process
Details: 
The cellular synthesis of RNA on a template of DNA.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI183563

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