Cre01.g022500.t1.2 NADP-malic enzyme 4

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g022500.t1.2 chromosome_1 NADP-malic enzyme 4 CDS 3511747 3518466 - 6 719

Phytozome

Locus Genomic View Functional Annotation
Cre01.g022500.t1.2 Cre01.g022500.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g519.t1, Cre01.g022500.t1.1 JGI196351 30789495 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0047
motif_0047_1

motif_0047_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0015
Motif Bicluster: 
bicluster_0047
Width: 
24
Number of Sites: 
1
Consensus: 
tanattgTtaaAtTgaAgcnAAAg
motif_0047_2

motif_0047_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00019
Motif Bicluster: 
bicluster_0047
Width: 
24
Number of Sites: 
1
Consensus: 
AgcagCAGcAgCAgcAGCaggGgC
 0.18
bicluster_0078
motif_0078_1

motif_0078_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000056
Motif Bicluster: 
bicluster_0078
Width: 
21
Number of Sites: 
1
Consensus: 
GTgtGcgTGtgcgTGgGTGtG
motif_0078_2

motif_0078_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000017
Motif Bicluster: 
bicluster_0078
Width: 
24
Number of Sites: 
1
Consensus: 
gCtcCtGCtgCaGCTcctgCagCt
 0.29

GO Terms

GO:0004471 GO:0055114 GO:0051287 -

malate dehydrogenase (decarboxylating) activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+. Does not decarboxylate oxaloacetate.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

NAD binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196351

Add comment

Log in to post comments