Cre01.g027150.t1.1 DEAD/DEAH box helicase, putative

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g027150.t1.1 chromosome_1 DEAD/DEAH box helicase, putative CDS 4119436 4129787 + 10 351

Phytozome

Locus Genomic View Functional Annotation
Cre01.g027150.t1.1 Cre01.g027150.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CPLD46, HEL5 g621.t1 JGI116679 30789072 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0018
motif_0018_1

motif_0018_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000003
Motif Bicluster: 
bicluster_0018
Width: 
21
Number of Sites: 
1
Consensus: 
CGCCGCtGcCGCtGCcGCtGC
motif_0018_2

motif_0018_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0018
Width: 
0
Number of Sites: 
1
 0.18
bicluster_0188
motif_0188_1

motif_0188_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000041
Motif Bicluster: 
bicluster_0188
Width: 
24
Number of Sites: 
1
Consensus: 
CCgcCaCCGCCagCnCcgcCnCca
motif_0188_2

motif_0188_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000039
Motif Bicluster: 
bicluster_0188
Width: 
15
Number of Sites: 
1
Consensus: 
CgGCAGCAGCAGCAG
 0.25

GO Terms

GO:0003676 GO:0005524 GO:0008026 GO:0016818 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATP-dependent helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of any acid anhydride which contains phosphorus.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI116679

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