Cre01.g028450.t1.2 Radical SAM superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g028450.t1.2 chromosome_1 Radical SAM superfamily protein CDS 4247910 4253252 - 5 342

Phytozome

Locus Genomic View Functional Annotation
Cre01.g028450.t1.2 Cre01.g028450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g650.t1, Cre01.g028450.t1.1 JGI406862 30788447 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0131
motif_0131_1

motif_0131_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3600
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
taTtTAtATtACaAt
motif_0131_2

motif_0131_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
ACATTgcAaTgCtTA
 0.12
bicluster_0204
motif_0204_1

motif_0204_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.000000031
Motif Bicluster: 
bicluster_0204
Width: 
24
Number of Sites: 
1
Consensus: 
CnGCCgCtGctnCtGCctCtGCcg
motif_0204_2

motif_0204_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
21
Motif Bicluster: 
bicluster_0204
Width: 
21
Number of Sites: 
1
Consensus: 
AaTAaaaTgTaTTcaaAaAnT
 0.23

GO Terms

GO:0003824 GO:0051536 -

catalytic activity

GO Category: 
molecular_function
Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.

iron-sulfur cluster binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI406862

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