Cre01.g033550.t1.2 thioredoxin family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g033550.t1.2 chromosome_1 thioredoxin family protein CDS 4836270 4840941 + 4 671

Phytozome

Locus Genomic View Functional Annotation
Cre01.g033550.t1.2 Cre01.g033550.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g759.t1, Cre01.g033550.t1.1 JGI189940 30788638 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0074
motif_0074_1

motif_0074_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000018
Motif Bicluster: 
bicluster_0074
Width: 
15
Number of Sites: 
1
Consensus: 
CaGCAGcAGCaaCAG
motif_0074_2

motif_0074_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0069
Motif Bicluster: 
bicluster_0074
Width: 
21
Number of Sites: 
1
Consensus: 
gCGGCgGCGGcGGCagTGGCG
 0.15
bicluster_0185
motif_0185_1

motif_0185_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000027
Motif Bicluster: 
bicluster_0185
Width: 
21
Number of Sites: 
1
Consensus: 
GCGGCGGCggCagcGGCgGcg
motif_0185_2

motif_0185_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0185
Width: 
24
Number of Sites: 
1
Consensus: 
atTGCATtGgGntCgagttacTTg
 0.13

GO Terms

GO:0045454 GO:0005783 -

cell redox homeostasis

GO Category: 
biological_process
Details: 
Any process that maintains the redox environment of a cell or compartment within a cell.

endoplasmic reticulum

GO Category: 
cellular_component
Details: 
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI189940

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