Cre01.g038600.t1.2 fatty acid desaturase 7

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g038600.t1.2 chromosome_1 fatty acid desaturase 7 CDS 5479791 5483835 + 4 044

Phytozome

Locus Genomic View Functional Annotation
Cre01.g038600.t1.2 Cre01.g038600.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g864.t1, Cre01.g038600.t1.1 JGI56237 30789324 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0037
motif_0037_1

motif_0037_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000069
Motif Bicluster: 
bicluster_0037
Width: 
21
Number of Sites: 
1
Consensus: 
CncCGCCActGcCnCCgCCac
motif_0037_2

motif_0037_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.034
Motif Bicluster: 
bicluster_0037
Width: 
24
Number of Sites: 
1
Consensus: 
TTGGTTTAGTgTgGGcTGGTaTnT
 0.20
bicluster_0070
motif_0070_1

motif_0070_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000057
Motif Bicluster: 
bicluster_0070
Width: 
24
Number of Sites: 
1
Consensus: 
CGCCagCacCgCCtCCaCCtccaC
motif_0070_2

motif_0070_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
76
Motif Bicluster: 
bicluster_0070
Width: 
15
Number of Sites: 
1
Consensus: 
cAAnTGaanAanAaA
 0.14

GO Terms

GO:0006629 GO:0016717 GO:0055114 -

lipid metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI56237

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