Cre01.g043350.t1.2 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g043350.t1.2 chromosome_1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain CDS 6081229 6085440 - 4 211

Phytozome

Locus Genomic View Functional Annotation
Cre01.g043350.t1.2 Cre01.g043350.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CAO g970.t1, Cre01.g043350.t1.1 JGI195951 30789542 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0062
motif_0062_1

motif_0062_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.8
Motif Bicluster: 
bicluster_0062
Width: 
23
Number of Sites: 
1
Consensus: 
gCTgCtGttgctGCTGtcaCTGc
motif_0062_2

motif_0062_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
11000
Motif Bicluster: 
bicluster_0062
Width: 
11
Number of Sites: 
1
Consensus: 
ATGGGTGTTGc
 0.07
bicluster_0185
motif_0185_1

motif_0185_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000027
Motif Bicluster: 
bicluster_0185
Width: 
21
Number of Sites: 
1
Consensus: 
GCGGCGGCggCagcGGCgGcg
motif_0185_2

motif_0185_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0185
Width: 
24
Number of Sites: 
1
Consensus: 
atTGCATtGgGntCgagttacTTg
 0.13

GO Terms

GO:0016491 GO:0051537 GO:0055114 GO:0010277 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

2 iron, 2 sulfur cluster binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

chlorophyllide a oxygenase [overall] activity

GO Category: 
molecular_function
Details: 
Catalysis of the reactions: chlorophyllide a + O2 + NADPH + H+ = 7-hydroxychlorophyllide a + H2O + NADP+; and 7-hydroxychlorophyllide a + O2 + NADPH + H+ = chlorophyllide b + 2 H2O + NADP+.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI195951

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