Cre02.g089237.t1.1 proteolysis 6

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g089237.t1.1 chromosome_2 proteolysis 6 CDS 2110210 2133735 - 23 525

Phytozome

Locus Genomic View Functional Annotation
Cre02.g089237.t1.1 Cre02.g089237.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g1664.t1 Not available 30786258 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0138
motif_0138_1

motif_0138_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3e-37
Motif Bicluster: 
bicluster_0138
Width: 
24
Number of Sites: 
1
Consensus: 
ACACaCACaCACACACACACACaC
motif_0138_2

motif_0138_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000013
Motif Bicluster: 
bicluster_0138
Width: 
15
Number of Sites: 
1
Consensus: 
ACACACacaCACACA
 0.23
bicluster_0183
motif_0183_1

motif_0183_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.5e-31
Motif Bicluster: 
bicluster_0183
Width: 
24
Number of Sites: 
1
Consensus: 
GtGTgcGTGTGTGtGtGTGTGtGt
motif_0183_2

motif_0183_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.7e-18
Motif Bicluster: 
bicluster_0183
Width: 
24
Number of Sites: 
1
Consensus: 
TGcGTgtGTGTGTGTGTgtgcGtG
 0.25

GO Terms

GO:0004842 GO:0008270 -

ubiquitin-protein ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.

zinc ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

Add comment

Log in to post comments