Cre02.g090150.t1.2 homolog of bacterial PANC

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g090150.t1.2 chromosome_2 homolog of bacterial PANC CDS 2256127 2259108 + 2 981

Phytozome

Locus Genomic View Functional Annotation
Cre02.g090150.t1.2 Cre02.g090150.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CAF2, PAN3, PANC g1684.t1, Cre02.g090150.t1.1 JGI97116 30785624 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0004
motif_0004_1

motif_0004_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7e-35
Motif Bicluster: 
bicluster_0004
Width: 
24
Number of Sites: 
1
Consensus: 
TgCTGCtgCTgCtgcTGCtGCngC
motif_0004_2

motif_0004_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0004
Width: 
0
Number of Sites: 
1
 0.27
bicluster_0011
motif_0011_1

motif_0011_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000051
Motif Bicluster: 
bicluster_0011
Width: 
24
Number of Sites: 
1
Consensus: 
GCAGCaGCAGccGCaGCaGCAGCa
motif_0011_2

motif_0011_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00091
Motif Bicluster: 
bicluster_0011
Width: 
24
Number of Sites: 
1
Consensus: 
GGCGGcgGcggcgGtgGCagngGc
 0.25

GO Terms

GO:0004592 GO:0015940 -

pantoate-beta-alanine ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate.

pantothenate biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI97116

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