Cre02.g093500.t1.2 Patched family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g093500.t1.2 chromosome_2 Patched family protein CDS 2693746 2701157 + 7 411

Phytozome

Locus Genomic View Functional Annotation
Cre02.g093500.t1.2 Cre02.g093500.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SSD1 g1765.t1, Cre02.g093500.t1.1 Not available 30786143 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0073
motif_0073_1

motif_0073_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
42
Motif Bicluster: 
bicluster_0073
Width: 
21
Number of Sites: 
1
Consensus: 
tatgTtcTaTTaCTtTncatT
motif_0073_2

motif_0073_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.4
Motif Bicluster: 
bicluster_0073
Width: 
21
Number of Sites: 
1
Consensus: 
gCtGcTGCcgCtGCTGcCGCC
 0.14
bicluster_0107
motif_0107_1

motif_0107_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000028
Motif Bicluster: 
bicluster_0107
Width: 
21
Number of Sites: 
1
Consensus: 
CgGCAgCaGCAGCGGCgGCgG
motif_0107_2

motif_0107_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00002
Motif Bicluster: 
bicluster_0107
Width: 
10
Number of Sites: 
1
Consensus: 
TTGTGTTTgt
 0.26

GO Terms

GO:0008158 GO:0016020 -

hedgehog receptor activity

GO Category: 
molecular_function
Details: 
Combining with a member of the hedgehog protein family and transmitting the signal across the membrane to initiate a change in cell activity.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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