Cre03.g144084.t1.1 RHOMBOID-like 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g144084.t1.1 chromosome_3 RHOMBOID-like 2 CDS 138388 143595 - 5 207

Phytozome

Locus Genomic View Functional Annotation
Cre03.g144084.t1.1 Cre03.g144084.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
RBL7 g2867.t1, Cre01.g056500.t1.1 Not available 30787921 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0077
motif_0077_1

motif_0077_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.007
Motif Bicluster: 
bicluster_0077
Width: 
20
Number of Sites: 
1
Consensus: 
AcTggTcGGTACAGTAACTC
motif_0077_2

motif_0077_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.014
Motif Bicluster: 
bicluster_0077
Width: 
24
Number of Sites: 
1
Consensus: 
CGACCCCGgCTAtGTCcGGGAgAT
 0.17
bicluster_0176
motif_0176_1

motif_0176_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000064
Motif Bicluster: 
bicluster_0176
Width: 
21
Number of Sites: 
1
Consensus: 
CAGCACCAgCagCAgcagCAc
motif_0176_2

motif_0176_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000039
Motif Bicluster: 
bicluster_0176
Width: 
15
Number of Sites: 
1
Consensus: 
tGGcgGtGGcGGCaG
 0.39

GO Terms

GO:0004252 GO:0016021 -

serine-type endopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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