Cre03.g149050.t1.1 Auxin-responsive family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g149050.t1.1 chromosome_3 Auxin-responsive family protein CDS 1125438 1129525 - 4 087

Phytozome

Locus Genomic View Functional Annotation
Cre03.g149050.t1.1 Cre03.g149050.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g3031.t1 Not available 30786854 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0025
motif_0025_1

motif_0025_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000013
Motif Bicluster: 
bicluster_0025
Width: 
24
Number of Sites: 
1
Consensus: 
tAgcnaCAgcAgCAacagcAgcAa
motif_0025_2

motif_0025_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.9e-21
Motif Bicluster: 
bicluster_0025
Width: 
21
Number of Sites: 
1
Consensus: 
GGCGGcGGtGGCaGCGGCnGC
 0.28
bicluster_0155
motif_0155_1

motif_0155_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000065
Motif Bicluster: 
bicluster_0155
Width: 
15
Number of Sites: 
1
Consensus: 
cCACaCAcgCaCaCA
motif_0155_2

motif_0155_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.024
Motif Bicluster: 
bicluster_0155
Width: 
21
Number of Sites: 
1
Consensus: 
GCCgcCaCCGCCtCCACCgCc
 0.25

GO Terms

GO:0016021 -

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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