Cre03.g158750.t1.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g158750.t1.1 chromosome_3 P-loop containing nucleoside triphosphate hydrolases superfamily protein CDS 2375537 2381019 - 5 482

Phytozome

Locus Genomic View Functional Annotation
Cre03.g158750.t1.1 Cre03.g158750.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HEL14 g3250.t1 JGI377548 30786604 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0080
motif_0080_1

motif_0080_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
140
Motif Bicluster: 
bicluster_0080
Width: 
23
Number of Sites: 
1
Consensus: 
GggGaAAtggATggtgAAGnAGA
motif_0080_2

motif_0080_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6300
Motif Bicluster: 
bicluster_0080
Width: 
21
Number of Sites: 
1
Consensus: 
CtcAtACcAaAaTaCAaTGTa
 0.16
bicluster_0173
motif_0173_1

motif_0173_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.17
Motif Bicluster: 
bicluster_0173
Width: 
24
Number of Sites: 
1
Consensus: 
gCCaCCncCacCgCCacccCCagc
motif_0173_2

motif_0173_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0173
Width: 
0
Number of Sites: 
1
 0.28

GO Terms

GO:0003676 GO:0005524 GO:0008026 GO:0004386 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATP-dependent helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.

helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI377548

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