Cre03.g166650.t1.1 DEA(D/H)-box RNA helicase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g166650.t1.1 chromosome_3 DEA(D/H)-box RNA helicase family protein CDS 3351955 3356158 - 4 203

Phytozome

Locus Genomic View Functional Annotation
Cre03.g166650.t1.1 Cre03.g166650.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HEL15 g3420.t1 JGI144028 30787330 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0115
motif_0115_1

motif_0115_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0115
Width: 
24
Number of Sites: 
1
Consensus: 
ATaccaGnacAaacnAAaccAAAA
motif_0115_2

motif_0115_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.099
Motif Bicluster: 
bicluster_0115
Width: 
21
Number of Sites: 
1
Consensus: 
TcgctTTCcTtGTGcTCTcTA
 0.18
bicluster_0118
motif_0118_1

motif_0118_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0051
Motif Bicluster: 
bicluster_0118
Width: 
20
Number of Sites: 
1
Consensus: 
CtgCTGctGcTgCCGcTGct
motif_0118_2

motif_0118_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.21
Motif Bicluster: 
bicluster_0118
Width: 
15
Number of Sites: 
1
Consensus: 
cAAcaaAttGcAACA
 0.17

GO Terms

GO:0003676 GO:0005524 GO:0008026 GO:0004386 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATP-dependent helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.

helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI144028

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