Cre03.g187450.t1.2 Ribose 5-phosphate isomerase, type A protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g187450.t1.2 chromosome_3 Ribose 5-phosphate isomerase, type A protein CDS 5660281 5661787 - 1 506

Phytozome

Locus Genomic View Functional Annotation
Cre03.g187450.t1.2 Cre03.g187450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
RPI1 g3883.t1, Cre03.g187450.t1.1 JGI55838 30787765 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0070
motif_0070_1

motif_0070_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000057
Motif Bicluster: 
bicluster_0070
Width: 
24
Number of Sites: 
1
Consensus: 
CGCCagCacCgCCtCCaCCtccaC
motif_0070_2

motif_0070_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
76
Motif Bicluster: 
bicluster_0070
Width: 
15
Number of Sites: 
1
Consensus: 
cAAnTGaanAanAaA
 0.14
bicluster_0178
motif_0178_1

motif_0178_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
15
Motif Bicluster: 
bicluster_0178
Width: 
15
Number of Sites: 
1
Consensus: 
GTGaGtGtAtgTGtt
motif_0178_2

motif_0178_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
49
Motif Bicluster: 
bicluster_0178
Width: 
15
Number of Sites: 
1
Consensus: 
GTGaTGGTggtGaTG
 0.10

GO Terms

GO:0004751 GO:0009052 -

ribose-5-phosphate isomerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate.

pentose-phosphate shunt, non-oxidative branch

GO Category: 
biological_process
Details: 
The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI55838

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