Cre03.g213649.t1.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g213649.t1.1 chromosome_3 P-loop containing nucleoside triphosphate hydrolases superfamily protein CDS 9216995 9219386 - 2 391

Phytozome

Locus Genomic View Functional Annotation
Cre03.g213649.t1.1 Cre03.g213649.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g4491.t1, Cre19.g757400.t1.1 Not available 30787503 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0055
motif_0055_1

motif_0055_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0011
Motif Bicluster: 
bicluster_0055
Width: 
24
Number of Sites: 
1
Consensus: 
TaTaaaaATntatncagaaAtgaA
motif_0055_2

motif_0055_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00056
Motif Bicluster: 
bicluster_0055
Width: 
15
Number of Sites: 
1
Consensus: 
cgTGTGTGTgTgTGT
 0.34
bicluster_0162
motif_0162_1

motif_0162_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000013
Motif Bicluster: 
bicluster_0162
Width: 
15
Number of Sites: 
1
Consensus: 
CnGCGGCGGcGGCaG
motif_0162_2

motif_0162_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0162
Width: 
0
Number of Sites: 
1
 0.26

GO Terms

GO:0003676 GO:0004386 GO:0005524 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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