Cre04.g214350.t1.1 DNA-directed DNA polymerases

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre04.g214350.t1.1 chromosome_4 DNA-directed DNA polymerases CDS 1397761 1414296 - 16 535

Phytozome

Locus Genomic View Functional Annotation
Cre04.g214350.t1.1 Cre04.g214350.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
POLA1 g4690.t1 JGI177262 30791491 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0141
motif_0141_1

motif_0141_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.001
Motif Bicluster: 
bicluster_0141
Width: 
15
Number of Sites: 
1
Consensus: 
CCgCCACCaCcaCCG
motif_0141_2

motif_0141_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.091
Motif Bicluster: 
bicluster_0141
Width: 
15
Number of Sites: 
1
Consensus: 
CAgCACcagCAgCAg
 0.18
bicluster_0158
motif_0158_1

motif_0158_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000011
Motif Bicluster: 
bicluster_0158
Width: 
21
Number of Sites: 
1
Consensus: 
GCAgtaGCagCAGCaaCAGCA
motif_0158_2

motif_0158_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.1
Motif Bicluster: 
bicluster_0158
Width: 
24
Number of Sites: 
1
Consensus: 
CaCCGcCtCCGCCtCCgCCTcCgC
 0.13

GO Terms

GO:0000166 GO:0003677 GO:0003887 GO:0006260 GO:0001882 -

nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

DNA binding

GO Category: 
molecular_function
Details: 
Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).

DNA-directed DNA polymerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer.

DNA replication

GO Category: 
biological_process
Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.

nucleoside binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI177262

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